Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1147 atgGGGAGAGAGGGTCCCCCAGAGAGGGGTGGATGTATCACAGCAAACAGGAGGAGTTCAGATGAAGATAGCAGTGCTTTTGTGTTTAAAAATTGTACCATAACTGGGAATGGAAAAGGATTGGCTAGCCTTGGAAGAGCATATGGAGATCATTCTAGAGTCATCATAGCCAATTCTTTTCTAGGCGACGTCGTTGCACCCCAAGGCTGGGTGGCTTGGACTGCAGTTGGCCACGAgtaa 240 0.475 MGREGPPERGGCITANRRSSDEDSSAFVFKNCTITGNGKGLASLGRAYGDHSRVIIANSFLGDVVAPQGWVAWTAVGHE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1147 79 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 79 - -
Sto7g1147 79 MobiDBLite consensus disorder prediction 1 22 - -
Sto7g1147 79 Gene3D - 3 78 IPR012334 -
Sto7g1147 79 SUPERFAMILY Pectin lyase-like 8 74 IPR011050 -
Sto7g1147 79 Pfam Pectinesterase 5 75 IPR000070 GO:0030599|GO:0042545
Sto7g1147 79 PANTHER PECTINESTERASE 7 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1147 Sto-Chr7 9502127 9502366 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1147 6 79 Carbohydrate Esterase AT2G19150 50.000 8.23e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1147 - - aprc:113866591 85.5001