Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1142 ATGGCGAAGAACATAATTTCGTCTTCTTCATTTATCGGCACGCCACTTCCTCCTTCACTATCTCGCCTTCGTCTTCGCGCCTTCCATCACCGCACGCAAGTTATTCGCACCAGAGTTAAATTCTGCTTCCACGAAATTCCCCCAATTCAATCTATTACATCTTCGTTTGACTATAACCATATTGTTGCTAGGGTTGAAGGCCTTCTTTACACCCTTGCGGACGCCACAGTTGCAGCGGATCCTGctgttgctgctgctgctgcttctGGTTCGAGCTCCGCAGATGCTGCTGTACAGAAGAATGGAGGGTGGTTTGGATTTGTATCCGAAGGGATGGAGTCTGTTCTCAAGGTGTTGAAGGATGCCCTTAGCGCCGTGCATGTGCCTTATTCATATGGATTTGCCATAATATTGCTCACTGTTATTGTTAAAGTTGCTACACTTCCCTTGACGAAGCAACAGGTCGAATCAACACTTGCTATGCAAAATCTTCAACCTCAAATTAAGGCCATTCAAGAAAGATATGCTGGAAATCAGGAAAGAATACAACTAGAGACGTCAAAGCTCTATAGGAAGGCTGGGGTTAACCCATTGGCTGGGTGTTTACCAACTTTGGCAACAATTCCAGTCTGGATAGGTCTCTATCAAGCTTTATCAAATGTGGCAAATGAGGGATTGTTAACAGAAGGTTTCTTTTGGATCCCATCTTTGGGTGGTCCTACTACCATTGCTGCTCGACAAAGTGGAGCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGCCATCCACCATTGGGTTGGCATGACACTGCAGCATATCTCGTTTTACCTACCCTTCTTGTTGTTTCACAATACGTTTCAATGGAAATCATGAAACCTCCTCAGACCAACGATccatctcaaaagaacacactTCTTGTTTTCAAGTTTCTGCCACTCTTGATTGGTTACTTCTCGCTGTCTGTCCCATCAGGATTGACAATTTACTGGTTTACAAACAATGTCCTTAGCACAGCTCAACAAGTATGGCTGCGCAAATTTGGAGGTGCAAAGCCTGTCGTGAATGAAAATGCAAGCGGAATTATTACTGCAGGACGTGCTAAACGATCGGCTGAGAAGCCTTCAAGAGCTGGTGAAAGATTTAGGCAGTTTaaagaagaggacaagaagaagaataaaTCAAGCAAGGCTCTTCCAGTGGAAGAGGCTCAAGCTCTGGCTTCTGATTCTAGCAACGTTTCAGATGAAGAAAGTAATGACAAGGTCAAATTTTTCCAGGATCAGGGAACTGGAGAAGAAGTATATGCTTCTACAGGTAGCAAAGAGAACCCGAGTTATTCTAGACAAAAAAGAAACAAGCGCTCAAAGCGGAAGCGTTCAGTATGA 1386 0.4214 MAKNIISSSSFIGTPLPPSLSRLRLRAFHHRTQVIRTRVKFCFHEIPPIQSITSSFDYNHIVARVEGLLYTLADATVAADPAVAAAAASGSSSADAAVQKNGGWFGFVSEGMESVLKVLKDALSAVHVPYSYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPQIKAIQERYAGNQERIQLETSKLYRKAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWHDTAAYLVLPTLLVVSQYVSMEIMKPPQTNDPSQKNTLLVFKFLPLLIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKFGGAKPVVNENASGIITAGRAKRSAEKPSRAGERFRQFKEEDKKKNKSSKALPVEEAQALASDSSNVSDEESNDKVKFFQDQGTGEEVYASTGSKENPSYSRQKRNKRSKRKRSV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1142 461 Pfam 60Kd inner membrane protein 132 346 IPR001708 GO:0016021|GO:0032977
Sto7g1142 461 PANTHER OXA1 1 455 IPR001708 GO:0016021|GO:0032977
Sto7g1142 461 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 455 - -
Sto7g1142 461 MobiDBLite consensus disorder prediction 364 461 - -
Sto7g1142 461 MobiDBLite consensus disorder prediction 431 445 - -
Sto7g1142 461 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 345 IPR028055 -
Sto7g1142 461 MobiDBLite consensus disorder prediction 369 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1142 Sto-Chr7 9461509 9466700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1142 23 394 Chloroplast and Mitochondria Gene Families AT2G28800 66.310 7.08e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1142 K03217 - csin:114294117 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1142 7 9461509 9466700 Sto7g1142 7 9461509 9466700 ECH