Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1121 ATGGAAAACCAAAAGATGAATGCTTCTTCAATTTCTGCCCCATCATCACCAGAGCTAGGTCTTTCAATCTCTCCAACTCGCATGGGAGTCGATTTTGATGACTTGGAGATATTGAATAGTACCGAAGAAAGTCGAGTTGTGCTAAAAAAAGCAACGGAGATCTTCATTGAAGAACTCAGCCTTCGTGCGTGGGTTCGAACTGGAGAGAAGAACAAGAACACTCTTGAGAGAAATGATTTTGCTGAGgaaattaatgaaaacaaaGTCTATGACTTCTTAGTTGATATTGTTCCAATGGATCCCAATGACCATCCCTCCAACGTCAAGGATTTTGGAAGCACTGAAAACTTCAACCAGCAGCCATTAACAGATCTCAGCAACATCATCAATCAACCTCCTTTCCAACAGAACCAAGCATTAGAAATGTTTTGGCAACAACAATTGTATGAGATACAGAATGCTGAagCAATTAGGGGCCAAAATCAATTGCCTCTGGCTCGAATCAAGAGAATTATGATGTCTGATTCTGATGTAAAGATGATCAGTGCGGAAACTCCAATATTACTATCAAAAGCATGTGAGATGTTCATTCAAGAAATGAGCCTTCGTGCTTGGATGCGAACTGACGAGAACAAGAGACGTACTATTCAACATCATGACGTTGCTGAATCTATTCATGAAATTAAACTCTATGACTTCTTAACTGATGTTATTCCATTGCAATACCAAGGTGGTCATCCATCTCTCGCGCCTCCACCTCAACCTCAACCTCagGAAGAGCATTCTAGACAAGCTGCAGAAAATCCTAATTATGCTGCTCCAATTGTTGATGAGAGTTTGATGAATATGGAGATTAATGTGACTgaCCAGCAAGCTGAAAGTAGCCAGAAGTATATTGAAGCCTTCACCATGGATCCATCCATTGTGCCTCCTCATCCTCAACTTCCCTACGACTTCCCTCCCCCAAATTAA 972 0.4043 MENQKMNASSISAPSSPELGLSISPTRMGVDFDDLEILNSTEESRVVLKKATEIFIEELSLRAWVRTGEKNKNTLERNDFAEEINENKVYDFLVDIVPMDPNDHPSNVKDFGSTENFNQQPLTDLSNIINQPPFQQNQALEMFWQQQLYEIQNAEAIRGQNQLPLARIKRIMMSDSDVKMISAETPILLSKACEMFIQEMSLRAWMRTDENKRRTIQHHDVAESIHEIKLYDFLTDVIPLQYQGGHPSLAPPPQPQPQEEHSRQAAENPNYAAPIVDESLMNMEINVTDQQAESSQKYIEAFTMDPSIVPPHPQLPYDFPPPN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1121 323 MobiDBLite consensus disorder prediction 1 24 - -
Sto7g1121 323 Gene3D Histone, subunit A 125 239 IPR009072 GO:0046982
Sto7g1121 323 Gene3D Histone, subunit A 33 100 IPR009072 GO:0046982
Sto7g1121 323 SUPERFAMILY Histone-fold 95 234 IPR009072 GO:0046982
Sto7g1121 323 SUPERFAMILY Histone-fold 39 98 IPR009072 GO:0046982
Sto7g1121 323 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 42 120 IPR027170 GO:0003700|GO:0006355|GO:0016602
Sto7g1121 323 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 130 276 IPR027170 GO:0003700|GO:0006355|GO:0016602
Sto7g1121 323 MobiDBLite consensus disorder prediction 1 22 - -
Sto7g1121 323 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 130 276 - -
Sto7g1121 323 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 42 120 - -
Sto7g1121 323 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 162 222 IPR003958 -
Sto7g1121 323 MobiDBLite consensus disorder prediction 244 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1121 Sto-Chr7 9258953 9264041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1121 140 239 CCAAT-HAP5 Transcription Factor Family AT1G56170 54.000 2.21e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto7g1121 CBFD_NFYB_HMF 6.6e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1121 - K08066 mnt:21409721 145.206