Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1119 ATGGCACAAAGAATCGGCACGAGACTCTTCATCAGCAGATTATCATTTTACACATCAGAGCGCCACCTCAGAGATCTGTTTTCTCCGTATGGAATGGTTAAAGAAGCTTTTCTTGTGAAGGACCCAAAAACTCTAAGGCCAAAAGGGTTTGGATTTGTCTCATTTGACTCAGAAATTGAAGCGGAGAAGGCTAGGAAAGCCATGAATGGCAGGGTAAAACTCTATGATAAGCTTTAA 237 0.4177 MAQRIGTRLFISRLSFYTSERHLRDLFSPYGMVKEAFLVKDPKTLRPKGFGFVSFDSEIEAEKARKAMNGRVKLYDKL 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1119 78 SUPERFAMILY RNA-binding domain, RBD 6 71 IPR035979 GO:0003676
Sto7g1119 78 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 6 72 - -
Sto7g1119 78 SMART rrm1_1 8 75 IPR000504 GO:0003723
Sto7g1119 78 Gene3D - 2 77 IPR012677 -
Sto7g1119 78 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 78 IPR000504 GO:0003723
Sto7g1119 78 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 71 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1119 Sto-Chr7 9248494 9248925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1119 6 72 Eukaryotic Initiation Factors Gene Family AT1G49760 31.343 3.24e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1119 K13195 - gmx:100781760 103.99