Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1108 atgccgATTTCTAGAATTGCGATCGGAAACGCGTCAGAGTTGAGCCAACCCGACGCCTTCAAGGCTGCACTGGCCGAGTTCATCTCAATGCTCATCTTTGTATTTGCAGGAGAAGGCTCCGGCATGGCTTTCAATAAGCTGACGGACAATGGTTCGACAACACCGGCTGGGCTGGTGGCGGCATCAATCGCTCACGCCTTTGGTCTGTTCGTGGCCGTGTCGGTGGGTGCGAACATCTCCGGTGGTCACGTCAATCCCGCCGTTACCTTCGGTGCCTTCATTGGTGGCCACATTTCGCTGCTTCGAAGCATTTTGTATTGGATTGCTCAGTTGCTTGGTTCTGTCGTTGCTTGCCTCCTCCTTAAATTTTCCACTGGTGGAATGGAAACGTCAGCATTTTCACTATCTTCTGGTGTGGGTGTATGGAACGCCGTCGTATTTGAGATCGTGATGACTTTCGGCTTGGTTTACACAGTGTACGCAACGGCGGTGGACCCAAAGAAGGGCGACATCGGAATAATCGCTCCTATTGCTATTGGTTTCATAGTGGGCGCTAACATCTTGGCCGGTGGTGCGTTTGACGGTGCATCCATGAACCCCGCGGTGTCGTTTGGGCCCGCCGTGGTTAGCTGGACTTGGGCCAACCAATGGGTCTACTGGCTCGGCCCATTCGTTGGTGCTGCCATTGCTGCCATTGTCTACGAGGTTTTCTTCATCAACCAGAACACTCATGAACAACTCCCAACCACAGATTATTAG 759 0.5217 MPISRIAIGNASELSQPDAFKAALAEFISMLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAASIAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGHISLLRSILYWIAQLLGSVVACLLLKFSTGGMETSAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANQWVYWLGPFVGAAIAAIVYEVFFINQNTHEQLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1108 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
Sto7g1108 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
Sto7g1108 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Sto7g1108 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g1108 252 SUPERFAMILY Aquaporin-like 14 244 IPR023271 -
Sto7g1108 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Sto7g1108 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1108 Sto-Chr7 9118910 9120996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1108 1 252 Major Intrinsic Protein MIP AT4G01470 80.556 6.07e-146 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1108 K09873 - csin:114278064 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1108 7 9118910 9120996 Sto12g0205 12 1224243 1224548 CCT
Sto7g1108 7 9118910 9120996 Sto7g1108 7 9118910 9120996 ECH
Sto12g0205 12 1224243 1224548 Sto7g1108 7 9118910 9120996 ECH