Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1088 ATGGAGCTAGCAGAGTTCGCGGCTGATGTGGAGAGTCTATTAGGGAGAGGACTAGAGAATGAGTGTATAGGAATGGAAGAGTTGGATCCAGAGGAGTGCTGGCCTGATCATTGcgtgCAAACAAACATGGATGATGCTCACGTGACAATGCTGCTTGGAGCTGCTAAGTTACTTCACGGCAGAGGCCACCAATTAAAGGTTGGTCTTGGATCATATAATTTCTATTCTAATCAAGAGAAGCTGTCTCCAACACTTTCATCACCAGCGAGTGTGTCTACCACTACTGTTTCTGGGTCTAATGGAACAGTAGTCTCAAaggcAACGCCAAAAGCTATATTAAAGCTGATGGACTCAGATGGATTGACCATCTTCCATGTGAAGAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGACTCAGCTCAAGGGAAATCAGACAAAAGAACGCATGTAGAAGAAGATGTGCATCGTCTTGACGCCAAAACTGGATTGCAAATCAGAGAGGCAATTCAGCTGCAGCTAGATGTTCAAAGGCGACTACATGAACAGCTAGAGATGCTGAACTCAGAAATATGGGATTGTAAAGGTCTGCAAGTTTGGCGAAAGATTTGCAGTGGTTCAATGAACAAGTTCATACCATTCCTGAACTATCCTCATTCAGCTGGTGGTCGAATGATTGAGAAAAAGAGGAAGGCAGAAGCAGAACAAACGAAACTTATCGCTAGGGACAAGGAGACACATCAGCAGCATAGCAGAATTGGTTCAATGAATAGTTATCCAATGGTAGGAAATGATCCACGTGGCATGCGCTCCAGTCCTTCTAGTACATCACGTGACGGAGTAAGCGATGGAAATACAAACTCAGCCTCAAATTTAAATGTGGGCTCAAATGACCAAAGTTATACTAGTCAAGCCAAAAATAGCCCAATGGCTACTTCTCCAGCTCAGCAACACCATCCAATGGTCACTTGGGGCACCTGTGATGAGACAAAACAGGGGGTCTATCTTAATCAGAGTAAATACATTCAAGACTTGCTTTGGAAGTTCAGAATGACACATTGTGCTCCAGTTACGACTCCTATGGTCACGGGAAAACAACTTTCAAAAGAAGACGGTGAACCATTATCTGATGTCACTTTGTATAGACAAGCAATGAGATCTCATGCAAGAACCAATGGTTTGCCCTTCCACATAGTAGATTGCGAAGAAGACATTCTGGTGGGCATCCACACACCAGCAGGGCTCACCTTCGATCCAAAATGCACAGATCCACGAAAGCACCTCGAAGCATTCACAGCCACCATGAAGCTGATGGGGGCGAGAAATGGACAACGTTACTGGATCTTCCCTACCACGTTCAATGGCAAAGCACTGCAATGGCTCATGACACTACCACAACCAACTACGTGA 1416 0.4421 MELAEFAADVESLLGRGLENECIGMEELDPEECWPDHCVQTNMDDAHVTMLLGAAKLLHGRGHQLKVGLGSYNFYSNQEKLSPTLSSPASVSTTTVSGSNGTVVSKATPKAILKLMDSDGLTIFHVKSHLQKYRIAKYMPDSAQGKSDKRTHVEEDVHRLDAKTGLQIREAIQLQLDVQRRLHEQLEMLNSEIWDCKGLQVWRKICSGSMNKFIPFLNYPHSAGGRMIEKKRKAEAEQTKLIARDKETHQQHSRIGSMNSYPMVGNDPRGMRSSPSSTSRDGVSDGNTNSASNLNVGSNDQSYTSQAKNSPMATSPAQQHHPMVTWGTCDETKQGVYLNQSKYIQDLLWKFRMTHCAPVTTPMVTGKQLSKEDGEPLSDVTLYRQAMRSHARTNGLPFHIVDCEEDILVGIHTPAGLTFDPKCTDPRKHLEAFTATMKLMGARNGQRYWIFPTTFNGKALQWLMTLPQPTT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1088 471 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 105 188 IPR044848 GO:0003700
Sto7g1088 471 MobiDBLite consensus disorder prediction 270 322 - -
Sto7g1088 471 MobiDBLite consensus disorder prediction 241 322 - -
Sto7g1088 471 SUPERFAMILY Homeodomain-like 105 135 IPR009057 -
Sto7g1088 471 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 136 IPR006447 GO:0003677
Sto7g1088 471 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 105 188 - -
Sto7g1088 471 Gene3D - 46 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1088 Sto-Chr7 8964433 8978396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1088 106 191 G2-like Transcription Factor Family AT3G04450 51.685 2.55e-22 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto7g1088 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1088 - - rcu:8287222 136.732