Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1060 ATGTCTGGTCGCGGAAAGGGAGGCAAAGGATTGGGAAAAGGAGGAGCGAAACGACACCGTAAGGTGCTCCGAGATAACATTCAAGGAATCACGAAGCCAGCGATCCGGCGTCTAGCTCGAAGAGGAGGTGTGAAGCGCATAAGCGGTCTCATCTACGAGGAGACTCGAGGAGTTCTTAAGATCTTTCTGGAGAATGTGATTCGCGACGCCGTCACCTACACGGAGCACGCGAGGAGGAAGACGGTGACGGCTATGGATGTCGTTTATGCGCTTAAACGACAGGGGAGGACCCTATACGGATTTGGGGGGAAAAGTCTTGCTGTCAAGAAGAAATGGCAAGGGTATAATGGTGAATATGTAATGTGA 366 0.5137 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGKSLAVKKKWQGYNGEYVM 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1060 121 PANTHER HISTONE H4 1 103 - -
Sto7g1060 121 MobiDBLite consensus disorder prediction 1 20 - -
Sto7g1060 121 CDD H4 18 101 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 ProSitePatterns Histone H4 signature. 15 19 IPR019809 GO:0000786|GO:0003677
Sto7g1060 121 PRINTS Histone H4 signature 5 16 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PRINTS Histone H4 signature 20 39 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PRINTS Histone H4 signature 40 60 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PRINTS Histone H4 signature 62 76 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PRINTS Histone H4 signature 77 89 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PRINTS Histone H4 signature 89 100 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 SMART h44 16 90 IPR001951 GO:0003677|GO:0030527
Sto7g1060 121 PANTHER HISTONE H4 1 103 - -
Sto7g1060 121 SUPERFAMILY Histone-fold 3 102 IPR009072 GO:0046982
Sto7g1060 121 Gene3D Histone, subunit A 2 103 IPR009072 GO:0046982
Sto7g1060 121 Pfam Centromere kinetochore component CENP-T histone fold 39 97 IPR035425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1060 Sto-Chr7 8612353 8612775 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1060 K11254 - npr:108798818 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1060 7 8612353 8612775 Sto12g0233 12 1381192 1390017 CCT
Sto7g1060 7 8612353 8612775 Sto7g1060 7 8612353 8612775 ECH
Sto12g0233 12 1381192 1390017 Sto7g1060 7 8612353 8612775 ECH