Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1055 ATGGAGCTCGATGGGAAGCCTAAAGTGGGGATGGAATTTGATAACTTGGAGAGTGCTTGGAAATTTTGGACGAGCTATGGTGGTAAAATGGGATTTGGGGTTAGGAAGGATTTTTTCAACAAGAGAAAAAAGGATGATGCAATAACTTCTTGTCGATTTGTATGTTCTAAAGAAGGGGTAAGAAGAAAAGATAAGAGGGATTATTTAACCGTTAATCCTAGACAGGAGACGAGAACTGATTGCAAAGCAAGAATTGTGCTTCGCCGTTTGAATGAGAAATTGAGAGTGAAAGAATTTGTAGAGGAGCATAATCAAAACTCGGCAAATCCATTGTTCTTTCATAAATTTCAAATGGATTCAGATGAGAaaataacaaacatattttGGGCCGATGTAAGAATGCAACTAGACTATGCTTATTTTGGTGATGTTGTCTCTCTCGATACAACATACTGGACAAACAATGCACATAGGCCGCTTGCCttgttttcaggatttaatcATCACAGAGGAGTTGTTATTTTTGGGGCTGCATTGTTATATGACGAGACGGCAGCATCATTCAAGTGGTTATTTGAGATGTTCTTGAAGAATTGCATTAAGCACTTAGGCAACTTAATGAAGCATGGGTCTCATTTCTTACGAGACTTCAAGGCTTGTATGTATGAGTATGAGGAAGAGAAAGAGTTCGGAGAGGCTTGGAGTCAGTTACTCTTAGATTATAAACAAAGAAGGCAAAGTGAGTCATTAATTGAATATGTCATTGATATGTATAAGCACAAAGGAGAGTGGAAAGTCTTGTTTCATACTCAAGAGAAATCAGTTTCTTGTACTTGGAGGAGGTTTGAGACCTTTGGTATATTGTGTTGCCATGCTTTGAAAGTGTTTGAGGCCAACGATGTCAAGTTAGTTCCTGATCAATACATTTTGAAAAGGTGGACAAAGATGGCCAGAACTGGTATTATATTTGATGTCAATGGGAATGAGGTTGAGGAGGACCCAAAATTTGGTCATACGCTTGAAATTAGACCTCTTTGCCAACGTTTTGTCAAGCTAGCTTCCGAAGTCACGGGTAAAGATGAAGTCTTGATACTTCGTTCAGCTACGGATGAAGTGATCAAGAAAGTTGAGGCACTTCGTTTGGGGAAAATACATGGGACAAATGAGAGTGATGATCCTATAATACCTAGTAGCAATGACATGTCAATACCAACCGGCATCAAGAAGAGGGTTGGAATTAAAAGAAGGAGTCGTCCAAAGAGTAGGGTTGAGCTTCAACTTCGAAATAGAAAAGCTTCAAGGTCTAGATCACATCCAACTGATATTGGAGCTTCAAGTCAAGTGCAATTGGAGAATTCATTTAGTTTTACGAGATTGTTAATGGACCAAAGTGAAGGATCGATCTCTCTTGGAGCATTAGAGTTTGGTGGTGACAAGCTATGA 1443 0.3853 MELDGKPKVGMEFDNLESAWKFWTSYGGKMGFGVRKDFFNKRKKDDAITSCRFVCSKEGVRRKDKRDYLTVNPRQETRTDCKARIVLRRLNEKLRVKEFVEEHNQNSANPLFFHKFQMDSDEKITNIFWADVRMQLDYAYFGDVVSLDTTYWTNNAHRPLALFSGFNHHRGVVIFGAALLYDETAASFKWLFEMFLKNCIKHLGNLMKHGSHFLRDFKACMYEYEEEKEFGEAWSQLLLDYKQRRQSESLIEYVIDMYKHKGEWKVLFHTQEKSVSCTWRRFETFGILCCHALKVFEANDVKLVPDQYILKRWTKMARTGIIFDVNGNEVEEDPKFGHTLEIRPLCQRFVKLASEVTGKDEVLILRSATDEVIKKVEALRLGKIHGTNESDDPIIPSSNDMSIPTGIKKRVGIKRRSRPKSRVELQLRNRKASRSRSHPTDIGASSQVQLENSFSFTRLLMDQSEGSISLGALEFGGDKL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1055 480 PANTHER OS01G0852650 PROTEIN 105 197 - -
Sto7g1055 480 PANTHER OS01G0852650 PROTEIN 197 246 - -
Sto7g1055 480 PANTHER OS01G0852650 PROTEIN 248 365 - -
Sto7g1055 480 PANTHER OS01G0852650 PROTEIN 4 110 - -
Sto7g1055 480 Pfam FAR1 DNA-binding domain 21 105 IPR004330 -
Sto7g1055 480 Pfam MULE transposase domain 144 217 IPR018289 -
Sto7g1055 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 110 IPR031052 GO:0006355
Sto7g1055 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 248 365 IPR031052 GO:0006355
Sto7g1055 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 105 197 IPR031052 GO:0006355
Sto7g1055 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 197 246 IPR031052 GO:0006355
Sto7g1055 480 MobiDBLite consensus disorder prediction 411 446 - -
Sto7g1055 480 SMART 26again6 275 302 IPR006564 GO:0008270
Sto7g1055 480 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1055 Sto-Chr7 8548435 8550803 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1055 MULE 7.4e-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1055 - - sspl:121800926 281.952