Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1052 ATGGAACAATCGGAGAAGCAATCTCACAGATCGCAATTCCCGAGAGATCCTCGCGGATCGCTGGAAGTGTTCAATCCGTCGTCGTATAACTCGTCGGAGAATTCGTCCAACTCGCCGTTCCGGTCGCAGCCGAAGTGGAAGGCGTGGATCGATTCGCCGCCACCGCCGCCGTCCGCCGGCGGCGGCGGAGGGAGTAAGGATGACGTCAGCAGCACGTCGTGGATGGCGCTTAAGGACtcgagtaataataataataataataattcctcCTCCGCCGCCACGGCGCAGACGCTTTCCGCTATACTTAACGATCCGGCGcagaggtcgccggcgacggcGGAAATCGGCGCGGCGGCGCAGAGGGCGGCGGAGTGGGGGCTGGTGCTGAAGACGGACACGGAGACGGGGAGGCCGCAGGGGGTGGCGGTGAGGACCTCCGGCGGGGAGGAAGGGAGCGGGACGTCGAGGCGGAACTCGAACAACTCGGTGAGGAGCTCGGGCGACTCGTCGGAGGACGGGGCGATCTTGAAGGAGGCGCGTGGGATCCCGAGGGTGTCGGAGGACTTGAAGGACGCGCTGTCGATGTTCCAACAGACGTTCGTGGTGTCGGATGCTACCAAACCCGATTACCCGATCCTGTATGCGAGTGCCGGGTTCTTCAAGATGACGGGATATACTTCCAAAGAGGTCATTGGAAGGAATTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAAGACGTATCGAAGATAAGAGAGGCATTGCAAGCTGGCACAAGTTACTGCGGAAGATTACTGAATTACAAGAAAGACGGCACTCCCTTTTGGAACCTTCTCACTATTTCTCCCATCAAGGACGACGATGGCAACGTTCTCAAGTTCATTGGAATGCAAGTGGAGGTTAGTAAGCATACAGAGGGGGCCAAGGAGAAGACTCTACGTCCCAATGGATTGCCTGAGTCTTTGATTCGATACGATgCTCGTCAGAAAGAGAAGGCTACCTCCTCAGTAACTGAGTTGGTCCAGGCTGTGAGGCGGCCACGGGCACTCAGTGAATCAGCAAACCGTCCGATGATCAGGATATCAGGAGGTGGTGATGAAGCAGAGAGAGCAAAAAGTTTGTTGAGGAGAAAATCGGAGAGCGTGGATGCATTAAGGCCAAAATCACAGGGAGCCCATAGAAATTCCATGCAGCGAATCAATGAGCTGCCTGAAACCAAACAGAAAAAATCCCGTCGGCGTTCTTTCATGGGGTTTATCAAGAAAAGTGAGCCCAATGATGAAAGCCTTGAAAATGAATTTGATGAGGGCAACTCTGAGAGTGAGGAAGATGAGAGGCCTGAAAGTATTGATGACAAAGTAACCCAAAGGGAAAAGCGAAAGGGTCTTGACCTTGCAACCACACTTGAACGTATTGAGAAGAACTTTGTTATTACTGATCCAAGATTGCCTGACAATCCCATAATCTTTGCATCTGACAGCTTCCTAGAGCTTACAGAGTACAGCCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATCGATAACCAAAAAGAAGTTACTGTGCagctaattaattatacaaagaGTGGAAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTTCAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAGCATGTGGAACCTCTTCACAACTGTATTGCAGAAGAATCCGCAAAGGAGGGAGAACATTTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAATGAGAGACCTTCCAGATGCAAATTTGACACCCGAAGATTTATGGTTAAATCATTCAAAAGTGGTTCATCCAAAACCTCATAGGAAGGATAACCCTTCTTGGAGAGCTATCCAGAAGATCCTAGACAGTGGAGAACAGATAGGCTTAAAGCACTTTAAGCCAGTAAAACCTTTGGGATCTGGAGATACTGGCAGTGTGCATTTAGTGGAACTATGTGGAACTGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTTCATAGAGCTTGCACAGAGAGAGAGATCCTCGAAATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATGTTTGTCTGATAACTGATTATTGTCCTGGTGGAGAATTGTTCTTGCTTCTTGATAGACAGCCGACAAAGGTACTCAGGGAAGATGCAGCTAGATTTTATGCTGCTGAAGTAGTGGTCGCACTGGAGTACCTCCATTGTCAAGGAATAATATATCGAGATTTGAAGCCAGAAAATGTGTTGCTCCAGAGCACTGGGCATGTGTCTCTGACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTCTAATTCCACCCacaaatgaaaagaagaaacaacAGAAAGGCCGTCAACAGCCTCCAATATTTATGGCTGAGCCTATGAGAGCGTCAAATTCTTTCGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGgaATTCTTCTATATGAAATGATGTATGGATATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTACAAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTGCATGCAAAGCAGTTAATGTACCGGTTGTTGCACAGAGATCCCAAACACCGATTGGGCTCACAGGAAGGAGCAAATGAAATAAAGCGTCACTCATTTTTCCGAGGTGTCAATTGGGCTCTTGTTCGTTGCACGAACCCTCCTGAGCTTGATGCTCCTCTTTTCGGGGCAAATGAAGATGAAAAGGAATCCAGAATTGTTGATCCTGCGGTAGAGGATCTACAGACAGATTATTTCTGA 2988 0.4629 MEQSEKQSHRSQFPRDPRGSLEVFNPSSYNSSENSSNSPFRSQPKWKAWIDSPPPPPSAGGGGGSKDDVSSTSWMALKDSSNNNNNNNSSSAATAQTLSAILNDPAQRSPATAEIGAAAQRAAEWGLVLKTDTETGRPQGVAVRTSGGEEGSGTSRRNSNNSVRSSGDSSEDGAILKEARGIPRVSEDLKDALSMFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVSKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKFIGMQVEVSKHTEGAKEKTLRPNGLPESLIRYDARQKEKATSSVTELVQAVRRPRALSESANRPMIRISGGGDEAERAKSLLRRKSESVDALRPKSQGAHRNSMQRINELPETKQKKSRRRSFMGFIKKSEPNDESLENEFDEGNSESEEDERPESIDDKVTQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQKEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEESAKEGEHLVKQTAENVDEAMRDLPDANLTPEDLWLNHSKVVHPKPHRKDNPSWRAIQKILDSGEQIGLKHFKPVKPLGSGDTGSVHLVELCGTGQYFAMKAMDKGVMLNRNKVHRACTEREILEMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLREDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSTGHVSLTDFDLSCLTSCKPQLLIPPTNEKKKQQKGRQQPPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMYGYTPFRGKTRQKTFTNILHKDLKFPKSKPVSLHAKQLMYRLLHRDPKHRLGSQEGANEIKRHSFFRGVNWALVRCTNPPELDAPLFGANEDEKESRIVDPAVEDLQTDYF 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1052 995 Pfam Protein kinase domain 664 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1052 995 MobiDBLite consensus disorder prediction 148 169 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 1 92 - -
Sto7g1052 995 Gene3D Phosphorylase Kinase; domain 1 661 745 - -
Sto7g1052 995 ProSiteProfiles PAC domain profile. 535 589 IPR000700 -
Sto7g1052 995 SUPERFAMILY PYP-like sensor domain (PAS domain) 206 298 IPR035965 -
Sto7g1052 995 ProSiteProfiles PAC domain profile. 259 313 IPR000700 -
Sto7g1052 995 SMART pac_2 538 580 IPR001610 -
Sto7g1052 995 SMART pac_2 262 304 IPR001610 -
Sto7g1052 995 TIGRFAM sensory_box: PAS domain S-box protein 212 306 IPR000014 -
Sto7g1052 995 TIGRFAM sensory_box: PAS domain S-box protein 486 576 IPR000014 -
Sto7g1052 995 ProSiteProfiles Protein kinase domain profile. 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1052 995 SMART pas_2 463 532 IPR000014 -
Sto7g1052 995 SMART pas_2 187 256 IPR000014 -
Sto7g1052 995 Gene3D Transferase(Phosphotransferase) domain 1 746 959 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 363 384 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 403 428 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 130 176 - -
Sto7g1052 995 ProSiteProfiles PAS repeat profile. 185 256 IPR000014 -
Sto7g1052 995 MobiDBLite consensus disorder prediction 429 447 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 23 43 - -
Sto7g1052 995 SMART serkin_6 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1052 995 MobiDBLite consensus disorder prediction 65 92 - -
Sto7g1052 995 MobiDBLite consensus disorder prediction 347 459 - -
Sto7g1052 995 CDD PAS 476 576 IPR000014 -
Sto7g1052 995 CDD STKc_phototropin_like 660 969 - -
Sto7g1052 995 PANTHER PHOTOTROPIN-1 130 995 - -
Sto7g1052 995 ProSitePatterns Protein kinases ATP-binding region signature. 668 691 IPR017441 GO:0005524
Sto7g1052 995 MobiDBLite consensus disorder prediction 1 16 - -
Sto7g1052 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Sto7g1052 995 Gene3D PAS domain 199 355 - -
Sto7g1052 995 CDD PAS 212 301 IPR000014 -
Sto7g1052 995 PANTHER FLIPPASE KINASE 1-RELATED 130 995 - -
Sto7g1052 995 SUPERFAMILY PYP-like sensor domain (PAS domain) 477 576 IPR035965 -
Sto7g1052 995 Pfam PAS domain 206 302 IPR000014 -
Sto7g1052 995 Pfam PAS domain 484 576 IPR000014 -
Sto7g1052 995 Gene3D PAS domain 449 614 - -
Sto7g1052 995 SUPERFAMILY Protein kinase-like (PK-like) 641 969 IPR011009 -
Sto7g1052 995 ProSiteProfiles PAS repeat profile. 461 534 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1052 Sto-Chr7 8526954 8540426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1052 1 995 AGC Kinase Gene Family AT3G45780 70.658 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto7g1052 Pkinase 3.5e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1052 7 8526954 8540426 Sto7g1052 7 8526954 8540426 ECH