Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1019 ATGTTTGATCTTAATCTGAATGCGGAGTCGACTGATTCGGTTCATGACGATGACGCCGTCATGTTCTTTGACAAGTTTCCTGAAGCTTCCGCGAATCAAATGGCGGACTCGGGGACTTCCAATTCCTCTAACGCCAATGCCGATGGCTCTAGCAATGGAGGAGGAGATGACGATTCCTGCTCTAGACGCGGCGGGGACGTCTTCACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGCGAAAGACGTCGCAAGCGAGGAGCTATTTCTGGTAGCTGGAGCGAAAAGAGTGGATGGCGAGTCTGGGAATTGGCAGGGTCAGTCTTCGTTGGCTCTTCCGTCGAGGAAGAGCTGGATGGGTCTCTCATTCGATCACCAAGGAGTGAACAGAGAGATAAAGATGGTTCAGGTTCAGCAACAACCTCAACCGCAAGTGAAGAAAAGCAGGAGGGGTCCAAGGTCTCGGAGCTCGCAGTATAGAGGGGTCACCTTCTACAGGAGGACCGGGAGATGGGAATCACATATCTGggattgCGGGAAACAAGTCTATTTGGGTGGATTTGACACCGCTCATGCCGCTGCTAGAGCCTACGACCGAGCTGCTATTAAGTTTAGGGGAGTTGATGCTGACATAAATTTCAATCTCAGTGACTACGAGGATGATCTTAAGCAGACGAAAAATCTCTCCAAGGAGGAGTTTGTGCATATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTCACTCTGCACAAATGCGGTCGTTGGGAAGCTCGAATGGGGCAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCTTACGACAAGGCAGCTATCAAATGTAACGGAAGGGAGGCAGTCACGAACTTTGAGTTAAGAACATACGAAGGGGAGATGAAGTCTGAATCCTTTACTGAAGGGGGCAATCACAATCTTGACCTCAATTTGGGCATAGCAACCCCGGGCAGTGATCCTGAAGAAAATAGGGGGCGTCCTCAGTTCCAGTCTTTCCCTTACAACATTCATGCTGGAAGAGTTTCAATGGTGGAGAGCAACATTGATTCAGTAATTGGCGATCCATCTTTGAGAAGGCTAGTTGTAACTGAAGATCGTCCTTCTGTGCAGAATGGCATGCGGCCTAGTTTCTTTCCCAATGAGGAAAGGGTAGAGAGAATCAACATTAGTCCTTCACAATCATCACAAGGGCTCCCTCACTGGGCATGGCAAACGCAAGGTCAGGTTACTGCTACATCAGTACCACCATTCTCTACTGCAGCATCATCAGGATTCTCCATTTCAGCTTCCTTTCCATCTCCAACTATGTTCCCTCCAAATCCTATCAATTCAATACCTCACAGCATCTGTTTTACTCCATCTGGCGCTTCTGGCGGCAACACATCACAGCATCATTACCACATCAAGTCACCTCAGACACCACTCTAG 1491 0.4816 MFDLNLNAESTDSVHDDDAVMFFDKFPEASANQMADSGTSNSSNANADGSSNGGGDDDSCSRRGGDVFTFNFDILKEEGAKDVASEELFLVAGAKRVDGESGNWQGQSSLALPSRKSWMGLSFDHQGVNREIKMVQVQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQTKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFELRTYEGEMKSESFTEGGNHNLDLNLGIATPGSDPEENRGRPQFQSFPYNIHAGRVSMVESNIDSVIGDPSLRRLVVTEDRPSVQNGMRPSFFPNEERVERINISPSQSSQGLPHWAWQTQGQVTATSVPPFSTAASSGFSISASFPSPTMFPPNPINSIPHSICFTPSGASGGNTSQHHYHIKSPQTPL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1019 496 MobiDBLite consensus disorder prediction 33 57 - -
Sto7g1019 496 CDD AP2 158 216 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 MobiDBLite consensus disorder prediction 33 60 - -
Sto7g1019 496 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 461 - -
Sto7g1019 496 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Sto7g1019 496 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 461 - -
Sto7g1019 496 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Sto7g1019 496 Gene3D AP2/ERF domain 249 309 IPR036955 GO:0003700|GO:0006355
Sto7g1019 496 MobiDBLite consensus disorder prediction 135 159 - -
Sto7g1019 496 CDD AP2 249 307 IPR001471 GO:0003700|GO:0006355
Sto7g1019 496 MobiDBLite consensus disorder prediction 475 496 - -
Sto7g1019 496 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1019 Sto-Chr7 8223835 8227347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1019 115 333 AP2-EREBP Transcription Factor Family AT4G36920 72.368 2.09e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Sto7g1019 AP2 3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1019 K09284 - gmx:100777102 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1019 7 8223835 8227347 Sto12g0244 12 1473616 1476917 CCT
Sto7g1019 7 8223835 8227347 Sto7g1019 7 8223835 8227347 ECH
Sto12g0244 12 1473616 1476917 Sto7g1019 7 8223835 8227347 ECH