Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1003 ATGATTGCGTTTCTGCATTGCATCCGTGCTGGTTCGTCGTTCTTGTCCATTACTGTGTTGGTTCGTCGTTCTTCTCCATTTGGTTCAcctctctttctttttggtCACTCCGTTCTCCAGCAAGAATTCGACGGAGAGAAGCAAGGCGAGAAGAAGTGGAAGTGCGATAAGTGCTCTGATTGGAATCTTGGAGCTCCTGCTCGTGTTGGTTTGGTTGTTCCAATTGATGTCGTAGTTCCTTCTGGCAGTACAGGGCTTGATCCATCTCAGACCTCTTTATTCCAGGTTGTGGCTGTAACCGTTGGTCTTGTGAGTGTGGCTGTCGGGATTGACATTCCTGTGTTCTATGAATCCCAAATAGATAGTGCAGTCAAGTCTTGTACTCTTCTACTTAATTTTACTTTACTATCAGTATCATCATTAATTCAACTACCTAACACAGACATTCAAGATATGCCACAGGATGTGATGGCCTTATGCCTGGTGTTTGGGAGAATAAACTTTCTAGCTTTCCTAAGGCTGGATTTTAGGATATTAAGTGTTTACGAGTTTTGA 555 0.4198 MIAFLHCIRAGSSFLSITVLVRRSSPFGSPLFLFGHSVLQQEFDGEKQGEKKWKCDKCSDWNLGAPARVGLVVPIDVVVPSGSTGLDPSQTSLFQVVAVTVGLVSVAVGIDIPVFYESQIDSAVKSCTLLLNFTLLSVSSLIQLPNTDIQDMPQDVMALCLVFGRINFLAFLRLDFRILSVYEF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1003 184 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 49 115 - -
Sto7g1003 184 Gene3D - 63 104 IPR043164 -
Sto7g1003 184 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE 49 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1003 Sto-Chr7 8090550 8094146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1003 48 131 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 46.429 3.95e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1003 K02941 - psom:113338246 60.4622