Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0995 ATGGATCCTTCTAGTCTCCAACAACAACATCAGGAAATGTCTAATAAGCAGTCATTGGAGAACATGATGGGttgctccaaagcacaagatcAAAGAAAGCCAAAGCCACAGCCAGAAGAAGCACTGAAATGCCCAAGATGTGACTCCACCAACACAAAATTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGATACTTCTGCAAGTCCTGCAGAAGATACTGGACCAAAGGAGGAACCCTCCGGAATGTTCCGGTAGGCGGAGGATGCCGAAAGAACAAAAGGCCGTCTTCGTCATCAAAGAGAGGAGGAATCCAAATCCAAGATCAtcatcaaccaccaccactgaccaccaccaccaccgcggCCACTAATTATGATTACCCTGATCTATCAATCCACTATGATAATCTTCTTGGGAATCTCAACATTAATCCAGCTGGATTATTTCTAGATGCATTCAGAAGTACTAATGGGTTCAATatggatcatcatcatcatcatcaaattcaaacccatcatcatcatcagcagCAGCAGCAATTCTTTGGAGGAGAGGTGGAAAATGGGGAAATGATGCTTCCCTATCATGAATATGACCAAGAAATTATCAGTGGGGGAAATGACAATAATGCCCCCACTACAACTTCTCAAGCTGTGAGTGTCACTACCATGAAGCAAGAGACTATGATGAATAATGGAAGGTCATCAGAAATGTTCTGGGGGCTTCTTCCATGGCAGATCAATGGAGGAGGAGATAATGATCATATGAATcagattaataataataattatgggCTTAATCCTACTTGGCATGGGCTTCTTAATAGTCCAGCTCTAATGTAG 849 0.3604 MDPSSLQQQHQEMSNKQSLENMMGCSKAQDQRKPKPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRPSSSSKRGGIQIQDHHQPPPLTTTTTAATNYDYPDLSIHYDNLLGNLNINPAGLFLDAFRSTNGFNMDHHHHHQIQTHHHHQQQQQFFGGEVENGEMMLPYHEYDQEIISGGNDNNAPTTTSQAVSVTTMKQETMMNNGRSSEMFWGLLPWQINGGGDNDHMNQINNNNYGLNPTWHGLLNSPALM 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0995 282 MobiDBLite consensus disorder prediction 86 118 - -
Sto7g0995 282 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Sto7g0995 282 MobiDBLite consensus disorder prediction 1 25 - -
Sto7g0995 282 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 9 279 - -
Sto7g0995 282 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Sto7g0995 282 MobiDBLite consensus disorder prediction 1 43 - -
Sto7g0995 282 MobiDBLite consensus disorder prediction 100 118 - -
Sto7g0995 282 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Sto7g0995 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 279 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0995 Sto-Chr7 7992800 7994384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0995 9 103 C2C2-Dof Transcription Factor Family AT5G60200 63.063 1.17e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto7g0995 zf-Dof 5.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0995 - - dzi:111285777 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0995 7 7992800 7994384 Sto12g0257 12 1541218 1542716 CCT
Sto7g0995 7 7992800 7994384 Sto7g0995 7 7992800 7994384 ECH