Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0992 ATGGAGTGTAGTGACGGAAATACCCCCACTTCCTCCTCCCccaccaataataataataataataatcaaaattcctcttcttcttcctcacaagTCGTCATCATTGCTAGCCCTTGTGCTGCCTGCAAGATCTTGAGGCGTAGGTGTGCTGAGAAATGTGTGTTGGCTCCTTATTTCCCTCCCACTGAGCCCACCAAGTTCACCATAGCCCACCGAGTCTTTGGTGCTAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGAGTCAAAGAGCGGATGCGGTGAGTAGTATGGTGTATGAAGCAAGTGCAAGAATAAGAGATCCCATATATGGGTGTGCCGGAGCCATATGCCAACTTCAGAAGCAGGTCAACGAGCTTCAGGCACAGTTGGCTAAGGCCCAGGCTGAGCTCGTGAATATGCAATTCCAGCAAGCCAATTTGGTGGCTCTAATTTGCATGGAAATGTCacaaactaataataataatcacgaTCCTCTGGAATCACAGTCTTCACCGCCGTGCCAACCGCAATCGCCGGACGATTTCATCTCGACCCCTCCTCACAACACCAATCTCAATTTCTTTGAGGATAACACAAGCCTTAACTCAATTTGGGAGCCACTTTGGACATGA 636 0.4387 MECSDGNTPTSSSPTNNNNNNNQNSSSSSSQVVIIASPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPIYGCAGAICQLQKQVNELQAQLAKAQAELVNMQFQQANLVALICMEMSQTNNNNHDPLESQSSPPCQPQSPDDFISTPPHNTNLNFFEDNTSLNSIWEPLWT 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0992 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 27 208 - -
Sto7g0992 211 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Sto7g0992 211 Coils Coil 117 144 - -
Sto7g0992 211 MobiDBLite consensus disorder prediction 1 27 - -
Sto7g0992 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 27 208 - -
Sto7g0992 211 MobiDBLite consensus disorder prediction 161 182 - -
Sto7g0992 211 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0992 Sto-Chr7 7943649 7945198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0992 34 211 AS2 family AT2G28500 64.481 7.09e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto7g0992 LOB 3.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0992 - - gmx:100819336 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0992 7 7943649 7945198 Sto12g0261 12 1574497 1575216 CCT
Sto7g0992 7 7943649 7945198 Sto7g0992 7 7943649 7945198 ECH