Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0986 ATGAAGCGATTAGCACCACCGCGCATGGCGAATCGTACGGACGAAAACGAACTCCAAACCCTACTTTCTGAGCAAAGCGAAGAGTTCACGATGGCTAAAGCCCTAGCTTCGGATTCCGACTTGGCGTTCCAACTACAAATGCAAGAAGCCGTTAATGCCTCCCTCGCTTCCCAACCCTCTGCTTCGTCGCCGTCGCAAACCGCCATTTTCACCGACGACGACGACAAGGCCTCCGCCGCTGTGGACTTGGCGGTGTCGCTCATGCTGGAGGACACGAAGAGGTTCACGCAAGAGCTTAAGGATCGCGAACATTCCCAAGCGGAGATGGCGAAAATGATGGAAGATCTGGACCGTCGGATTTTCGATCAGAATTTCGCGAGAAACATTCTGAACATTCCAAAGGAAGAGTGGAGAAAGAACGGCGATAATTTCCATATGCCCTACGATGCTGACGGAGCAGCATCGTCGTCGTCGCTCCGGAGCACTTCTCTTGCCGCAGAGTGTTTCAAAGTGTACTGCAAGGGTTTGGTGAGCGAAGAGAGGGTTAGGGATATGAGCGTGAAGGTGGCTTCCATTGGGATTGCCATTTGTGATTCGAGGGATTATCTAATTTTTGAAGTGAAGAAGCCTCTTGACGTAATGGAAACTGGTGGTGTCGTGCTTACTACTGAGTCTGCTGAGCTTCAGGCTGTGGTTGAAGGCCTTGTTAAGGCTCTTGACTTGGGATTACAAAGGGTTACCTTTTTCTGTGATGACTATATGCTTTACCAATATGTTACAGGCAGAGTGCTAGCTAGCCGCAACAGTAAGTTTGCTGGGCTACTTGATCAGGTCTTTAATCTTCAAAGAAAATTTGTGTATTGTGTCCCATCTCTTGCTGCACGAAAAGATGTCAAATATGCTTTTAAATCTGCAAGAGATGCAATAGTTTCTCAGATCAAATGGTCTGCGGAAACTGATAAAGGTACCACTAGCTTTAAGGAGACCTGTGCAATTTGCTTCGAAGATACTGATGTTGATAAAATGTTTTCAGTGGATCACTGTTTGCATAGATATTGTTTTTCATGCATGAAACAGCATGTAGAGGTGAAGCTGCTTAATGGCATGATGGCCAAGTGCCCTCATGAAGGATGTAACTCTGAGGTGACTGTTGATAGGTGCAGAAAATTTTTAGCTCCAGAATTAGTTGAAGTTATCAGCCAACGAATGGAGGAATCAGCTATTCCTGTTTCAGAGAAAGTGTATTGCCCATTTCCTAAGTGTTCAGCATTAATGTCAAAGCGCAAGGGTCTTGGAGTTCCTTGGCATTACAATATGACCTGCTATCAGTATAGTATTTCAAATCCTCGTGTTCATGCACAAGATGATATGGTGAAGTCCCTTGCTAACAAGAAACTGTGGCGACAGTGCGTGAAGTGCAATCACATAATTGAACTAGCTGAAGGTGTGGGTATGAATTTTGTTACACATGTGGAGAACCATGGAAGAACAAGAAAGCAACATGCTCTTGTCCAATCTGGGATGAGGCTAACATCATACGTGATCGGCATCAAAGAAGAAGACAATGACTGTACATAG 1578 0.4537 MKRLAPPRMANRTDENELQTLLSEQSEEFTMAKALASDSDLAFQLQMQEAVNASLASQPSASSPSQTAIFTDDDDKASAAVDLAVSLMLEDTKRFTQELKDREHSQAEMAKMMEDLDRRIFDQNFARNILNIPKEEWRKNGDNFHMPYDADGAASSSSLRSTSLAAECFKVYCKGLVSEERVRDMSVKVASIGIAICDSRDYLIFEVKKPLDVMETGGVVLTTESAELQAVVEGLVKALDLGLQRVTFFCDDYMLYQYVTGRVLASRNSKFAGLLDQVFNLQRKFVYCVPSLAARKDVKYAFKSARDAIVSQIKWSAETDKGTTSFKETCAICFEDTDVDKMFSVDHCLHRYCFSCMKQHVEVKLLNGMMAKCPHEGCNSEVTVDRCRKFLAPELVEVISQRMEESAIPVSEKVYCPFPKCSALMSKRKGLGVPWHYNMTCYQYSISNPRVHAQDDMVKSLANKKLWRQCVKCNHIIELAEGVGMNFVTHVENHGRTRKQHALVQSGMRLTSYVIGIKEEDNDCT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0986 525 ProSiteProfiles TRIAD supradomain profile. 326 525 IPR044066 -
Sto7g0986 525 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 40 428 IPR031127 GO:0004842|GO:0016567
Sto7g0986 525 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 433 482 IPR031127 GO:0004842|GO:0016567
Sto7g0986 525 Pfam Reverse transcriptase-like 189 307 IPR002156 GO:0003676|GO:0004523
Sto7g0986 525 ProSitePatterns Zinc finger RING-type signature. 348 357 IPR017907 -
Sto7g0986 525 SUPERFAMILY RING/U-box 328 409 - -
Sto7g0986 525 Gene3D - 169 309 IPR036397 GO:0003676
Sto7g0986 525 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 324 412 IPR013083 -
Sto7g0986 525 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 433 482 - -
Sto7g0986 525 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 40 428 - -
Sto7g0986 525 ProSiteProfiles Zinc finger RING-type profile. 330 374 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0986 Sto-Chr7 7875493 7878459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0986 169 493 C3H Transcription Factor Family AT2G19610 33.333 1.32e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0986 - - jre:108989645 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0986 7 7875493 7878459 Sto7g0986 7 7875493 7878459 ECH