Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0970 ATGGAAATTGATCTGAACCATGCAATAGTGAGTGAGGTTGAGAAGAATGGTTTCTGTAATGGGCACTGTGAAAAAGGTGCTTCTTGTGCTTCTTGTTTCTCCTCTGCTTCTActacctcttcttcttccaattcCTCTTCTTCACCTCTTGTGTCTTCTTCTTACCTTGAACTCTGGCACGCTTGTGCTGGCCCTCTCACCTCACTCCCTAAGAAAGGAAATGTAGTGGTTTACTTCCCCCAAGGTCACCTTGAACAGCTTTCCTCTTTCTGTCCTTTTTCATCCTTGGACATGCCCACCTATGAGCTTAAGCCCCAAATCTTTTGTAGGGTCGTCAACGTCCAGCTTCTTGCCAATAAGGAGAATGATGAGGTTTATACACAGGTTACTTTGCATCCCCAGGCAGAGTTAGCAGGGAAGCATATGGAGGGCCAAGAACTCGAGGAATTAGCATATGAGGAGGAAAATGGAGGATCACCTGCAAAATCAACCCCTCATATGTTCTGCAAAACGCTTACTGCATCTGATACCAGCACTCATGGGGGGTTCTCGGTTCCTCGCAGGGCGGCTGAAGACTGTTTTCCTCCTTTGGACTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCCAAGGACCTTCATGGAGTAGAGTGGAAATTTCGTCATATTTATAGAGGTCAGCCAAGGCGGCATCTGCTTACAACTGGCTGGAGTATTTTTGTTAGCCAAAAGAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAAAATGGAGAGTTGAGATTGGGAATCAGAAGAGCTGTTCGACCTAGAAATGGTCTTCCAGAATCAGTTATTGGTGATCAGAATTGTTATCCCAATTTCCTATCTTCAGTGGCTAATGCTATATCCACCAAAAATGTGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCCGAGTTTGTTGTGCCCTACCAAAAATATGTCAAAAGCATTAAGAATCCAATGACCGTTGGGACAAGATtcaaaatgaaatttgaaatgGATGAATCACCAGAAAGAAGGTGTGGTGGTGGTATAGTGACCGGAATACGTGATTTGGATCCCTTTAGATGGCCTAAATCAAAATGGAGGTGCCTGATGGTCAGATGGGATGAAGATATTGCTACTAATCATCAAGAACGGGTCTCTCCATGGGAGATTGAGGCTTCTGTTTCTCTCCCTCCTTTGAGCATCCAGTCATCCCCTAGACTAAAGAAATTGCGGATGAGTCTGCAAGCTGCCACACCTAGTCACCTCATGACCGGCGTGGCAGCAGGTGGTAATGGATTTATGGACTTTGAGGAGTCTGTAATATTATCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGTGTCACACTATTATGGATGTGATGCAGTAACCAACCAGCCAGATTTTGAGATGAGTCCTCCAAGTCATCCGAATCTTGCATCAACCGGAGTAAGAAAGGCTACTGCTGCTGCTGAGCTTATGAGGGTTCACTCTTCTAGTTATGCAGGCTTTGCAGAAACTAACAAGCTTCTGAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGAGATCGCTGAAAGGAAAGGCTGATTTTAACCTCGGCGCGTGGGGTAAACCCGGTGTTAGTTGCTCGGCTTTCAACCTACATCAGGCATCCAAACCGAACTTCCTCTCTTCAGGACCAGAAGTCGTTCAAACTGCATATTTTCCTTATGGTGACATTCACAGAGCTGGTCAAGGTAGCTTGTGCTCCAAACCTGCAAATTTCCCCAGAGAGATGAATGTCCACATGCCTTCCACTCAGGCGGAGATCATAACAAATGAAGTCGGACGGTCAGATCATCCTAATAAGGAGAAACTGCAGGACAGTATAGGGATTCCAAATGATGGCAGTTTCAAGGGGAAGGTAAATAATGCCTGTAAACTATTTGGATTTCCCTTGTCTGGAGAAGCGAATTCGAATTCTCAGAATTTACAGAACACTGCTGCCAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGACTGAGCAGCTACAATGATCTGTTGAATGAACTAGAGCGGCTATTTGGCATGGAAGGTCTTATTAAAGATCCCAATAAAGGATGGAGGGTCCTGTACACCGACAGCGAAAATGACATAATGGTTGTGGGGGATGACCCATGGCATGAGTTCTGCAATGTGGTGTGCAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACACTTGGGATGATAAGTGATGATACCCAGAGCTGTTTGGAACAGGCACCAGTGGTAATGGAGGCTTCAAAGTCTTCATCAGTGGGGCAGCCAGATTCTTCTCCAACAGAAGTTAGAGTCTAA 2409 0.4442 MEIDLNHAIVSEVEKNGFCNGHCEKGASCASCFSSASTTSSSSNSSSSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQLSSFCPFSSLDMPTYELKPQIFCRVVNVQLLANKENDEVYTQVTLHPQAELAGKHMEGQELEELAYEEENGGSPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESVIGDQNCYPNFLSSVANAISTKNVFHVFYSPRASHAEFVVPYQKYVKSIKNPMTVGTRFKMKFEMDESPERRCGGGIVTGIRDLDPFRWPKSKWRCLMVRWDEDIATNHQERVSPWEIEASVSLPPLSIQSSPRLKKLRMSLQAATPSHLMTGVAAGGNGFMDFEESVILSPKVLQGQENTGFVSHYYGCDAVTNQPDFEMSPPSHPNLASTGVRKATAAAELMRVHSSSYAGFAETNKLLRVLQGQEICPLRSLKGKADFNLGAWGKPGVSCSAFNLHQASKPNFLSSGPEVVQTAYFPYGDIHRAGQGSLCSKPANFPREMNVHMPSTQAEIITNEVGRSDHPNKEKLQDSIGIPNDGSFKGKVNNACKLFGFPLSGEANSNSQNLQNTAAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLNELERLFGMEGLIKDPNKGWRVLYTDSENDIMVVGDDPWHEFCNVVCKIHIYTQEEVEKMTLGMISDDTQSCLEQAPVVMEASKSSSVGQPDSSPTEVRV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0970 802 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 790 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sto7g0970 802 Pfam B3 DNA binding domain 168 269 IPR003340 GO:0003677
Sto7g0970 802 Gene3D - 166 270 IPR015300 -
Sto7g0970 802 Pfam Auxin response factor 294 376 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Sto7g0970 802 Gene3D - 670 763 - -
Sto7g0970 802 Pfam AUX/IAA family 665 758 IPR033389 -
Sto7g0970 802 SMART B3_2 168 270 IPR003340 GO:0003677
Sto7g0970 802 CDD B3_DNA 166 268 IPR003340 GO:0003677
Sto7g0970 802 ProSiteProfiles PB1 domain profile. 674 756 IPR000270 GO:0005515
Sto7g0970 802 PANTHER AUXIN RESPONSE FACTOR 12 790 - -
Sto7g0970 802 SUPERFAMILY DNA-binding pseudobarrel domain 160 279 IPR015300 -
Sto7g0970 802 Gene3D - 332 404 - -
Sto7g0970 802 ProSiteProfiles B3 DNA-binding domain profile. 168 270 IPR003340 GO:0003677
Sto7g0970 802 SUPERFAMILY CAD & PB1 domains 676 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0970 Sto-Chr7 7731365 7738343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0970 52 802 B3 DNA Binding Superfamily AT5G60450 59.603 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Sto7g0970 B3 1.3e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0970 - - gmx:100812909 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0970 7 7731365 7738343 Sto7g0970 7 7731365 7738343 ECH