Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0968 ATGGAGGGAGATCATGCTCAAGTAGTAGTGGGGTCTAAGTTTCCACCAGGTTTCAGATTTCACCCATCAGATGAAGAACTCATAGTTCATTACTTGCAGAACAAGATCTCATCTCGTCCACTTCCAGCATTCATTATAGCTGAAATTGATCTCTACAAGTATAACCCATGGGAGCTACCCaAGAAGGCAGTGTTTGGGGAGGATGAATGGTATTTCTTTAGCCCAAGAGAGAGGAAGTACCCAAATGGGATGAGGCCAAACAGAGCAGCAGGAAGAGGGTACTGGAAAGCCACAGGAACAGATAAGGGAATTGTGAGCAGAGGAGGATCAAAAAGGATAGGAGTGAAGAAAGCACTTGTGTTCTACACAGGAAGACCTCCCAAAGGGAACAAGACTCAATGGATTATGAATGAATACAGATTAGTGGATACTACCAATGATAACAACAAACCCTCCTCCAGGTTTAAAGGCTCCATGCGATTGGACGACTGGGTGCTATGTCGGGTTCGACATAAAGGCTACTTATCCAAGACTTCTTGTGAGGATCATTGTGAACCAaatttgcagacaaaaacaaatGAACCAAGGTGTGAGGAAATACACCCAACAGACACAAACCTTGAAGCTAACCTGGTCACAGATTATGAATACAAAGACTATCGAATCTTAGCCTCCATTCTTGTGGGTGAACCTGTATTTCCCATCCAGAACATCTCAGGCCTGAGCTTCAGAGGCAGCAAAGGCAAAAGCTTCAATTCAGTGTATGAAGAAGATTCCAGCAAAGTGAATTCTCATATAACAATTCCTTCATTGGAAAGCTACTTCAACCCACTGAATACAAAAtcttatgatgatgatgatcaataTGGTAATCTCATCTGTTTTAACAGGAAGCCAAGCATTGATAATAAAATAGATCAAGGTTTTAACATGAATTGCAATAACCAGAATCAACCTCAAGATGGTTTCGATGATTCCGAAGACCGAGTCGAGAAAACCGAAACGGATCAGAATTTCAGAACCCCAAGTCCGAAAGACAGATCCAAGTCGGATGAATTACCGATCAAGAAATCAAACTCCGCCTGCAGATCGACGGTAGAGCTTGCCGAACACGTGAAGCGCGGTGACGAAACCGATGAAGCAGAGGCTCATGACGAGCACGACGGTGGGGGAAATCTTCAGCCCAGGGGCGTCGTCGGTGTAGAACCTCAGCATGTTGGCGCCGCCACCGGATCCGCCCGCGACTGCGCCGGAGCTGTTTCCCCCGCCTCCTCCGCCGAGACGGCGGCGGCGCATACCGGCGGTTGCAGCGGCGGAGCCGCGTGGAGCCATGACTCCGGGTCGCGTGGTGGGAGCATTAGTAGTAGATTGAGATTGAGAGGAACCTCTCGCCATGGTTGCTGA 1404 0.4637 MEGDHAQVVVGSKFPPGFRFHPSDEELIVHYLQNKISSRPLPAFIIAEIDLYKYNPWELPKKAVFGEDEWYFFSPRERKYPNGMRPNRAAGRGYWKATGTDKGIVSRGGSKRIGVKKALVFYTGRPPKGNKTQWIMNEYRLVDTTNDNNKPSSRFKGSMRLDDWVLCRVRHKGYLSKTSCEDHCEPNLQTKTNEPRCEEIHPTDTNLEANLVTDYEYKDYRILASILVGEPVFPIQNISGLSFRGSKGKSFNSVYEEDSSKVNSHITIPSLESYFNPLNTKSYDDDDQYGNLICFNRKPSIDNKIDQGFNMNCNNQNQPQDGFDDSEDRVEKTETDQNFRTPSPKDRSKSDELPIKKSNSACRSTVELAEHVKRGDETDEAEAHDEHDGGGNLQPRGVVGVEPQHVGAATGSARDCAGAVSPASSAETAAAHTGGCSGGAAWSHDSGSRGGSISSRLRLRGTSRHGC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0968 467 MobiDBLite consensus disorder prediction 367 391 - -
Sto7g0968 467 SUPERFAMILY NAC domain 10 172 IPR036093 GO:0003677|GO:0006355
Sto7g0968 467 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Sto7g0968 467 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Sto7g0968 467 MobiDBLite consensus disorder prediction 322 356 - -
Sto7g0968 467 MobiDBLite consensus disorder prediction 428 467 - -
Sto7g0968 467 MobiDBLite consensus disorder prediction 306 398 - -
Sto7g0968 467 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 312 - -
Sto7g0968 467 PANTHER NAC TRANSCRIPTION FACTOR 56 10 312 - -
Sto7g0968 467 MobiDBLite consensus disorder prediction 306 321 - -
Sto7g0968 467 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0968 Sto-Chr7 7685945 7690550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0968 6 259 NAC Transcription Factor Family AT1G69490 48.679 8.25e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0968 NAM 6.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0968 - - gmx:100817193 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0968 7 7685945 7690550 Sto7g0968 7 7685945 7690550 ECH