Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0965 ATGGCTGACCCGGTCCATGTTTGCCAAACCCTCTccgggaagaagaagaaggttctGGTCATAATGGGTTCAACCGGCACCGGAAAATCCAAGCTCTCCATCAGCTTGGCCTCCCACTTCCCTTCCGAGATCATCAACTCCGACAAGATCCAAGTCTACAAGGGCTTCGACATCGTCACCAACAAGGTCCCCTCCTCCGAGCGCCGCGGCATCCCCCACCACCTCCTCGGCGTGGTGGACGACGCCTCCGCCGACTTCACGTCCCTCGACTTCTGCCGGCACGCGCTCGGGACCCTCGCCCTCGCCGCGCGGAACGGGAACCTCCCCATCATAGTCGGGGGATCCAACAACTACCTGAAAACCCTAATCCAAGACCCCGACCACGAATTCCGTGCCAACTACGATTGCTGCTTCATCTGGCTCGACGTGTCCCTCCCGGTTCTCTTCAACTACATCAGCAAGCGAGTCGATGAAATGCTCGAAGCCGGGCTCCTGGACGAGATCCGGGAAGCCTTCGTCCCGGACGCGGACTACACCCGCGGGGTCCGGCGAGCCATCGGAGTTCTCGAGCTCGACGAATACGTCAGGTTCGAGAGAGAAAACAACGAGGCTTCCAAGGAGGAGCTACTGAAGGCATCCATTAGAAGGACGAAGGAGAATACTCATAGGTTGGCCGAAGCCCAACGGGAAAAGATTCTCAAGCTGAGGAATGAACTCGGGTGGGAGATCAACAAGATTGACGCTACCCAAGTGTTCGAGGCCATGGAAAAGGGGGAAGAGCATGAGAAACTCTGGGAAGAGATAGTCTTCAAGCCCAGCTTCGATATAGTGAAGCTGTTCTTGGAGAAACCATACAAGAAGAATTATGGTGGCCATGAaaatgaaggaagaagaagaattggaTCAGGAGGAGAGAAAAGATGGAAAAGGGATAGTTGTTATGGAATTGAGATCAAAGGACAATTTTGCCCTTGTCATCACTCATAG 987 0.5228 MADPVHVCQTLSGKKKKVLVIMGSTGTGKSKLSISLASHFPSEIINSDKIQVYKGFDIVTNKVPSSERRGIPHHLLGVVDDASADFTSLDFCRHALGTLALAARNGNLPIIVGGSNNYLKTLIQDPDHEFRANYDCCFIWLDVSLPVLFNYISKRVDEMLEAGLLDEIREAFVPDADYTRGVRRAIGVLELDEYVRFERENNEASKEELLKASIRRTKENTHRLAEAQREKILKLRNELGWEINKIDATQVFEAMEKGEEHEKLWEEIVFKPSFDIVKLFLEKPYKKNYGGHENEGRRRIGSGGEKRWKRDSCYGIEIKGQFCPCHHS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0965 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 145 243 - -
Sto7g0965 328 Coils Coil 218 238 - -
Sto7g0965 328 Pfam IPP transferase 129 229 - -
Sto7g0965 328 Pfam IPP transferase 51 125 - -
Sto7g0965 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 288 IPR039657 -
Sto7g0965 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 10 288 - -
Sto7g0965 328 Gene3D - 15 281 IPR027417 -
Sto7g0965 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 180 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0965 Sto-Chr7 7652462 7657737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0965 132 282 C2H2 Transcription Factor Family AT2G27760 33.708 9.13e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0965 K10760 - gmx:121173984 358.992