Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0956 ATGGGCTGTTGTAGTTGCTTCGGGTTCATCAGAAAATCTAAACGTCAGATTGTTAAGCTTGGTGTCAATAAAAATCTCTCTCAGGAGCTATTGTTAGATGAAGAcattgaagatgatgatgattcaTATAATGATGAGGTTACTAGCACCACCAGCGGAGCTGATAGTGAAGCGCCACCTCGTGCCAATCGATCTGAGGATATTTTGAAATTGAAAGCAGAGAATGGCATGATATGTAGGCAGTTTCCTGTTAAAGAAACTAACAAAGTTGTTCGTACAGAGGATGAAAAAGGGAACAAGATGATAAATGAATATGTTCGTGAATATAAGATTGGCTCTGGTAGCTATGGGAAAGTGGTTCTATATCGAAGTTCTGTAGATGGAAAGCATTATGCAATTAAGGCTTTTCACAAGTCTCACTTACTGAAGCTTCGAGTTGCGCCCTCGGAGACTGCCATGACTGATGTTTTGCGTgagAAGgttaaaatgaaacaaatacTTTCTTTTCAGGTACTTATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATCACTTTTACATGGTACTTGAATATGTGGAAGGAAAATGGGTTTGTGAGGGTACAGGACCTCTTTCCGGCTTAGGTGAAGAAACTGCTAGGAAGTACTTGCGTGATATAGTTTCGGGATTAACGTATCTCCATGCTCATCATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTCGTCATGGTACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCATTCGAGGATGATAATGATGAGCTTCGTCGGTCACCTGGCACTCCTGTCTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCATGGTAAAGCTGCAGATACATGGGCAGTCGGAGTTACTTTGTACTGTATGATACTGGGTGAATATCCCTTTCTTGGAGATACACTTCAGGATACCTATGACAAAATAGTCAATAATCCTTTAGTACTTCCGGATGATTTAAATCTGCAGTTGAAGAATTTGATAGAAGGACTACTTTGCAAAGATCCAAAACTAAGGATGACATTGAGTGATGTTGCGGAGCATAGCTGGGTTATAGGAGAGGATGGGCCAATTCCTGAGTACTTGTGCTGGTGCCAACGCCAGAGCTTGGAGAGTTAA 1197 0.3985 MGCCSCFGFIRKSKRQIVKLGVNKNLSQELLLDEDIEDDDDSYNDEVTSTTSGADSEAPPRANRSEDILKLKAENGMICRQFPVKETNKVVRTEDEKGNKMINEYVREYKIGSGSYGKVVLYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREKVKMKQILSFQVLIMKMVEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGPLSGLGEETARKYLRDIVSGLTYLHAHHIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNLQLKNLIEGLLCKDPKLRMTLSDVAEHSWVIGEDGPIPEYLCWCQRQSLES 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0956 398 SMART serkin_6 105 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0956 398 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 396 - -
Sto7g0956 398 MobiDBLite consensus disorder prediction 39 63 - -
Sto7g0956 398 Gene3D Transferase(Phosphotransferase) domain 1 215 383 - -
Sto7g0956 398 SUPERFAMILY Protein kinase-like (PK-like) 101 388 IPR011009 -
Sto7g0956 398 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 396 - -
Sto7g0956 398 Pfam Protein kinase domain 105 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0956 398 ProSiteProfiles Protein kinase domain profile. 105 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0956 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Sto7g0956 398 CDD STKc_LKB1_CaMKK 111 377 - -
Sto7g0956 398 Gene3D Phosphorylase Kinase; domain 1 99 212 - -
Sto7g0956 398 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0956 Sto-Chr7 7567530 7572720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0956 97 376 CBL-interacting serine-threonine protein kinases AT5G35410 32.500 8.66e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Sto7g0956 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0956 K00908 - gmx:100776013 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0956 7 7567530 7572720 Sto7g0956 7 7567530 7572720 ECH