Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0950 TTGTTGTTTCTGAGCATACTTGTCTCCCTGCAAGCCATAGTTTCTGCCATTGATGCTACTTGGTACGATGCTCATGCAACCTTCTATGGTGACATGCGAGGAGGAGACACCATGcAAGGTGCATGTGGCTACGGTGACCTCTTCAAGCAAGGTTACGGGCTCGAGACCGCCGCCCTGAGCACGGCCCTCTTCAACAACGGCCTATCGTGCGGCTCGTGTTTCGAGATCATGTGCGTGAACGACCCTCAGTGGTGCATAAAGGGCGCCGGCACGATCAAAGTCACGGCCACCAACTTCTGCCCTCCCAACCACGACCAGCCAGACATCCACCATTGGTGCAACCCTCCCGCGAGGCACTTCGACCTCTCCATGGCCATGTTCACCAAGATCGCCGTCTTCAAGGCCGGCATCGTCCCGGTCCGCTACCGGCGCGTGGCCTGCGCGAAGTCCGGCGGCGTCAAGTTCGAGCTGAAGGGGAACCCTAATTGGCTCCTTGTGTTGTTCTACAATGTGGCCAATGCTGGGGACGTTACTAATGCGAAGATTAGAGGGTCTGGCTCTAGTGGGTGGAGTCAAATGAAGCGGAATTGGGGGCAAAATTGGCAAATCGGGGGGAATTTGGTGGGGCAAAGCTTGTCGTTTCAATTGACCACTAGTGATGGCAAAACGGTGGAGTTTGATGGTGTCGTTCCTTCGAATTGGAAATTTGGACAGTCGTTTGAGGGAAATAAGAATTTCTAG 741 0.5425 LLFLSILVSLQAIVSAIDATWYDAHATFYGDMRGGDTMQGACGYGDLFKQGYGLETAALSTALFNNGLSCGSCFEIMCVNDPQWCIKGAGTIKVTATNFCPPNHDQPDIHHWCNPPARHFDLSMAMFTKIAVFKAGIVPVRYRRVACAKSGGVKFELKGNPNWLLVLFYNVANAGDVTNAKIRGSGSSGWSQMKRNWGQNWQIGGNLVGQSLSFQLTTSDGKTVEFDGVVPSNWKFGQSFEGNKNF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0950 246 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 152 IPR007112 -
Sto7g0950 246 SUPERFAMILY Barwin-like endoglucanases 20 170 IPR036908 -
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 20 35 IPR007118 GO:0005576
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Sto7g0950 246 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Sto7g0950 246 Pfam Expansin C-terminal domain 153 231 IPR007117 -
Sto7g0950 246 PANTHER EXPANSIN-A15 8 246 IPR002963 GO:0009664
Sto7g0950 246 Gene3D - 152 246 IPR036749 -
Sto7g0950 246 PRINTS Expansin signature 51 65 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 163 184 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 78 89 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 127 140 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 110 127 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 199 220 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 228 244 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 92 102 IPR002963 GO:0009664
Sto7g0950 246 PRINTS Expansin signature 151 163 IPR002963 GO:0009664
Sto7g0950 246 SMART dpbb_1 56 142 IPR007112 -
Sto7g0950 246 Gene3D - 7 148 IPR036908 -
Sto7g0950 246 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 162 242 IPR007117 -
Sto7g0950 246 Pfam Lytic transglycolase 56 142 IPR009009 -
Sto7g0950 246 SUPERFAMILY PHL pollen allergen 149 242 IPR036749 -
Sto7g0950 246 PANTHER EXPANSIN-A21-RELATED 8 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0950 Sto-Chr7 7485809 7487405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0950 6 246 Expansin Gene Family AT5G39300 60.166 6.38e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0950 - - thj:104805509 387.882