Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0941 ATGGCGATGGCTGTGGCTCAACACAGAGAAAATAGTAGCGGGAGCATTACCAAGCACCTTGATGCCTCCGGGAAATATGTGCGGTACACGGCTGAGCAGGTCGAAGCGCTCGAACGAGTTTATGCTGAGTGCCCCAAGCCGAGCTCCTTGCGAAGGCAGCAGTTAGTTCGAGAGTGTCCAATTCTTGCGAACATCGAGCCGAAGCAAATCAAAGTTTGGTTCCAGAATCGCAGGTGTAGAGAGAAGCAGAGGAAAGAGTCTTCCCGGCTTCAGACTGTAAATCGGAAGCTCACAGCAATGAACAAGTTGTTAATGGAGGAGAATGATCGGTTGCAGAAACAGGTGTCGCAACTAGTATGCGAGAATGGGTTTATGCGGCAGCAGTTGCATACTCTGGTAAGACTTTTTGTTGATGTTAACGGCATTTGTTGCTATATCACTGGTTTCGTGCAGCCATCAATAGCAAATACTGATGCAAGTTGTGATTCAGTTGTTACTACTCCTCAGCATTCTTTAAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTAGAACCAGCAAAGattGCGGAGATCCTGAAAGATCGTACATCTTGGTTTCGGGATTGCCGGAGCCTAGAAGTTTTTACAATGTTCCCTGCTGGGAATGGTGGAACTATTGAACTTGTTTACACACAGACATATGCTCCAACAACATTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACGACTTTGGACAATGGCAGTCTCCTGGTTTGTGAAAGGTCATTGTCTGGTTCTGGAGCTGGCCCTAATGCAGCTGCCGCAGCACAATTTGTGAGAGCTGAAATGCTTCCTAGTGGCTACTTGATTCGACCTTGTGAGGGTGGAGGATCAATCATCCACATTGTGGACCACCTAAATCTTGAGccTTGGAGTGTGCCTGAGGTGCTACGACCACTCTATCAATCATCAAAAGTGGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCTCAAGAAACTAGTGGTGAAGTGGTATATGGTTTGGGTAGGCAACCTGCTGTTCTGCGAACTTTCAGCCAAAGGTTAAGCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTACTGAACTGTGATGGTGCTGAGGATGTAATTATTGCAGTTAATTCAACAAAGAATTTGAGTGGCACTACTAATCCTGCTAATTCCCTGACATTCCTTGGGGGAATCCTCTGTGCAAAGGCTTCCATGTTACTCCAAAACGTACCCCCTGCAGTTTTGGTTCGCTTTCTGAGGGAGCACCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCGTCACTGAAAGCTGGATCCTATGCCTATCCTGGAATGAGGCCTACAAGGTTCACTGGCAGTCAAATTATCATGCCTCTTGGCCATACAATTGAACAGGAAGAGATGATTGAAATTATTCGGCTTGAAGGCCACTCTGTTTCTCAAGAGGATGCCTTCGTTTCAAGGGACATTCATCTCCTACAGATATGTAGTGGAATAGATGAGAACGCTGTGGGAGCTTGTTCAGAGCTCATATTTGCTCCAATTGATGAAACTTTCCCAGATGATGCTCCATTGGTGCCTTCTGGTTTCCGGATCATTCCATTGGATTCTAAACCAGGTGATAAGACGGATGCAGTGACTACAAATCGGACCTTGGATTTGACATCTGGTCTTGAAGTGGGTCCAGCAACAAATCCTGCTGCAACAGATGAATCATCAAGTCATAACACTCGATCAGTGTTGACGATTGCCTTCCAATTTCCTTTTGACCTCAATCTGCAGGACAATGTTGCAATCATGGCTCGGCAGTATGTTCGAAGTGTGATTTCCTCAGTGCAGAGGGTTGCCATGGCCATTACTCCATCTGGTATAAACCCATCAGTTGGGCCAAAACTCTCTCCGGGCTCTCCAGAAGCTCTTACATTAGCTCACTGGATCTGCCAGAGTTATAGGCAATCGCTGCCGGTGTTCATCTTTGCAAACCAGGCAGGCCTTGACATGCTGGAAACAACTCTAGTGGCTTTACAAGACATCACATTGGATAAAATATTTGATGAGGCTGGACGCAAGGCATTGTGTGCAGACTTTCCCAAGCTAATGCAGCAGGGGTTTGCTTATCTACCAGCTGGAATCTGCATGTCCACAATGGGGCGGCATGTTTCTTTTGACCAAGCCATCGCCTGGAAAGTGCATGCTGCAGAAAATGACACTGTTCATTGTTTGGCTTTCTCTTTCGTGAATTGGTCATTTGCGTGA 2490 0.4687 MAMAVAQHRENSSGSITKHLDASGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTLVRLFVDVNGICCYITGFVQPSIANTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPAKIAEILKDRTSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLDNGSLLVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEPWSVPEVLRPLYQSSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVNSTKNLSGTTNPANSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEQEEMIEIIRLEGHSVSQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDETFPDDAPLVPSGFRIIPLDSKPGDKTDAVTTNRTLDLTSGLEVGPATNPAATDESSSHNTRSVLTIAFQFPFDLNLQDNVAIMARQYVRSVISSVQRVAMAITPSGINPSVGPKLSPGSPEALTLAHWICQSYRQSLPVFIFANQAGLDMLETTLVALQDITLDKIFDEAGRKALCADFPKLMQQGFAYLPAGICMSTMGRHVSFDQAIAWKVHAAENDTVHCLAFSFVNWSFA 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0941 829 ProSiteProfiles START domain profile. 174 402 IPR002913 GO:0008289
Sto7g0941 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 732 IPR044830 GO:0003700
Sto7g0941 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 731 828 IPR044830 GO:0003700
Sto7g0941 829 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Sto7g0941 829 CDD START_ArGLABRA2_like 178 394 - -
Sto7g0941 829 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Sto7g0941 829 SMART START_1 183 393 IPR002913 GO:0008289
Sto7g0941 829 Gene3D - 18 91 - -
Sto7g0941 829 Gene3D - 218 400 IPR023393 -
Sto7g0941 829 SUPERFAMILY Bet v1-like 183 395 - -
Sto7g0941 829 Coils Coil 94 121 - -
Sto7g0941 829 SUPERFAMILY Homeodomain-like 22 86 IPR009057 -
Sto7g0941 829 CDD bZIP 77 116 - -
Sto7g0941 829 CDD homeodomain 25 85 IPR001356 GO:0003677
Sto7g0941 829 Pfam MEKHLA domain 725 828 IPR013978 -
Sto7g0941 829 Pfam START domain 184 391 IPR002913 GO:0008289
Sto7g0941 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 732 - -
Sto7g0941 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 731 828 - -
Sto7g0941 829 SMART HOX_1 22 88 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0941 Sto-Chr7 7392502 7398622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0941 1 828 Homeobox Transcription Factor Family AT5G60690 78.201 0.0 1395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto7g0941 START 1.3e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0941 K09338 - gmx:100804870 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0941 7 7392502 7398622 Sto7g0941 7 7392502 7398622 ECH
Sto12g0303 12 1811886 1819161 Sto7g0941 7 7392502 7398622 ECH