Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0933 ATGAAGGATCCTTGGATTTTGGACAAGAATTTCAATGGTCTATCAGATGAAATCTTTGATGATGTCATAAAGTTTTTTGATTTCCCATTGGAGGATGTGGAAACTAATCttgcagaagaagaagattggGATGCTCAATTTAAGCGCATTGAAGAGCCATCTTTTGATGTTTTCTCAGTATCATCATCTGAATTGTGTGGTAAAACTCAAAATGGCAATTCAAAACTTGGGAGGACTTTCTCTGCTTCTTGCAATGAGGTTTACCCCATAAAACAAGAGGCAGAGACTGCTGAACCTAACGTCTCCTTCAATAAAAAGGATCTTCTCCATTTCCAAACCTACAGTCCAGTTTCTGTATTTGAAAGCAGTAGTTCTTCCTGTGGCGAGAATTCCAACTTTGACCTTCCTGTCATCCCAGCAAAGCGCGCCCGAGGCAGGCGCCGGCGTCTCTCGAGCTTCAGCCCTCTACTGTCAATTCCTTTCATCTCTacttcaccaccaccaccttaCCAAAAATCTCATACTGATTCAGACATGGAAACACACCTCAAAGCAGGGAAGTTATTAAATAGAATGAAAAAGGAGAGGAAAAAGGATGTGCTTCTTCTCTCAGGCGATACCGATACCAACATGAACAAATCCtcaggtgaggacctaggtgcacCTAGAAAATGCATGCATTGTGAAGTGACAAAGACTCCACAATGGAGGGAAGGGCCTATGGGTCCGAAAACCCTCTGCAATGCATGTGGTGTTCGGTATAGGTCCGGCCGCCTATTTCCCGAATACCGCCCGGCGGCTAGTCCCACTTTTGTGCCATCTTTGCATTCCAATTCCCACAGAAGGGTCATAGAGATGAGGAAAAGAGGAGGCATCCAAAAGACCCTTGGGCGTGGTTCTATTCTGGCTTTTGCATCAAATCTTCCTGCAAATTCTCTGGGAtag 945 0.4116 MKDPWILDKNFNGLSDEIFDDVIKFFDFPLEDVETNLAEEEDWDAQFKRIEEPSFDVFSVSSSELCGKTQNGNSKLGRTFSASCNEVYPIKQEAETAEPNVSFNKKDLLHFQTYSPVSVFESSSSSCGENSNFDLPVIPAKRARGRRRRLSSFSPLLSIPFISTSPPPPYQKSHTDSDMETHLKAGKLLNRMKKERKKDVLLLSGDTDTNMNKSSGEDLGAPRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHRRVIEMRKRGGIQKTLGRGSILAFASNLPANSLG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0933 314 CDD ZnF_GATA 224 271 IPR000679 GO:0006355|GO:0043565
Sto7g0933 314 ProSiteProfiles GATA-type zinc finger domain profile. 219 255 IPR000679 GO:0006355|GO:0043565
Sto7g0933 314 PANTHER GATA TRANSCRIPTION FACTOR 20 289 - -
Sto7g0933 314 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 20 289 - -
Sto7g0933 314 ProSitePatterns GATA-type zinc finger domain. 225 250 IPR000679 GO:0006355|GO:0043565
Sto7g0933 314 Pfam GATA zinc finger 225 258 IPR000679 GO:0006355|GO:0043565
Sto7g0933 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 282 - -
Sto7g0933 314 Gene3D - 217 295 IPR013088 GO:0006355|GO:0008270
Sto7g0933 314 SMART GATA_3 219 269 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0933 Sto-Chr7 7327181 7330239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0933 8 293 C2C2-Gata Transcription Factor Family AT1G08010 39.799 2.52e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto7g0933 GATA 3.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0933 - - aprc:113853859 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0933 7 7327181 7330239 Sto7g0933 7 7327181 7330239 ECH