Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0901 ATGAAAAAACCTAAATCAAAGGAATTTCGCAAGCGACACAGGCTCCAAGAAGACGATGAGATTAAGCTCTTGGACTCATGGATTCAGTCCCAGAAACCAGACTCCGGCTCCAATCCCATGGCGTTTCCTCCTCTACCCTCCAAAGCCCCCATCGGTCGCCTCGACGACAATACGTTCTCACGCTATGCGGGTGTCACGAGGTTCGACCAGTTGCCAATTTCTCAGAAAACCAAGGATGGATTGCGAGGAGCTAAGATGGTCGAGATGACTGATATACAGAGGGCTTCTTTGCCTCACGCAATTTGTGGACGAGATATTCTTGGTGCAGCCAAAACTGGGTCTGGAAAAACCTTGGCTTTCATTATTCCGGTCTTAGAAAAGTTATATAGAGAGAAATGGGGACCTGAAGATGGGGTAGGCTGCATTATCATATCTCCTACAAGAGAATTAGCTTGTCAACTGTTTGATGTTTTAAAAAGTGTTGGTAAGTACCACAATTTTAGTGCTGGCCTCCTGATTGGTGGTCGCAAGGATGTTGAAATGGAAAAAGAACGCGTAAATGAGCTCAACATTTTGGTCTGCACACCTGGTCGGCTTCTACAACACATGGATGAAACTCCAAACTTTGATTGTACTCAGATGCAGATGTTAGTACTAGATGAGGCAGATAATATTCTTGACAGGGGATTTACGAAGACAGTAAATGCAATCATCTCACAGCTTCCAAAGCATAGACAAACAATGCTTTTCTCAGCGACTCAAAGAAAGTCTATTCAGGATCTTGCAAGACTAAGTTTAAAGGACCCAGAGTATCTGAGCGTCCACGAAGAGTCTGTGACTGCTACTCCTACTCTCTTGAGACAGATTGTAATGATTGTTCCTCTAGACCAAAAGCTAGACATGTTGTGGAGTTTCATAAAGACGCATCTTAGCTCCCGAACACTTGTCTTTCTTGCTACCTGTAAACAGGTAAAATTTGTCTTTGAAGCATTTAAGAAACTACGCCCTGGCATACCCTTGAAGTGTCTTCATGGAAGGATGAAGCAAGAAAGAAGGATTGCAATATATTCCGAGTTCTGTGAGAAGCGTTCTGTTCTCCTCTCAACAGATGTGGCTGCAAGAGGCCTTGATTTTAATAAGGCAGTTGACTGGGTTATTCAGGTCGATTGTCCTGAAGATGTAGCATCTTACATACACAGGGTTGGTCGCACTGCTCGCTATAAGTCTGAGGGGAAGTCAGTTTTATTTCTCATGCCTTCTGAGACGAAAATGCTTGAAAAATTAGAAGCAGCTAAAATTCCAGTACATCTCAGTAAGCCTAATAAAGAACGGCTGCAACCAGTTTCTGATTCGTTGGCATCTTTACTGGTCAAGTACCCAGACTTTCAGCCTCGGGCACAAAGGGCCTTTGTAACATATTTGAGATCCATTCGTATACAGAGGGATAAAGAAATCTTCGATGTTATGAAATTGCCAATTGATGAATATTCAACATCATTGGGTCTGCCAATGACCCCCAAGATTCGTTTTCttaatcaaaaaaataaatctaaagCTTTGTCAACAAAACCAGATTTAGCTGAACCAGAAGAAGATTCAGATAAGGAAATTACGTTGAAGATTCCAAGAAAGAAGCCAGACCCTAGCAATCTCCAGGAAGAGGAAGCAGAAAAAGAACTTTTGCTAGCCGATTCCTCAGATGAAGAGGAAGGAAAAACTTCTGAAGTTTTAGATGCCATACCACCGGCAACCCGTGTTccaaagaaaaagaagctcaAGATCAACATACATAGACCAGTGGGGACTAGGGTTGTATTTGATGATGAAGGGAATGCACTACCTCCACTAGCGAGGATCGCTGATACACAAAGTGCCAAGGGAACATTGCTTGATCCAGAACAAAAAGCCGAGTACTATAGAAAGATGCGGGAGGAGTTGAAGAAAGTAGACAAGGAAGACAAGCTTGTGCAACGTGAGCGCCATAGAGAGAAGAGAATCAAGGAGAAGATAAAGTGGAAGGAAGGGAATGCAGAAGAGGACGACAACAATATTTCCGGGTCGGAAGGAAATGAAACTGCAGATAGACGGCATAAAAAGAGGAAGATATATTTCAATAGTGACAGTGATGACGGTAAGCAAACTGAAGTCACAACTAATGGCGTCTCTGATTCTGTTACTTTGGAGGAGCAAGAAGCGCTGGCTCTGAAATTGTTGAATTCCATGCACTCATAG 2232 0.4238 MKKPKSKEFRKRHRLQEDDEIKLLDSWIQSQKPDSGSNPMAFPPLPSKAPIGRLDDNTFSRYAGVTRFDQLPISQKTKDGLRGAKMVEMTDIQRASLPHAICGRDILGAAKTGSGKTLAFIIPVLEKLYREKWGPEDGVGCIIISPTRELACQLFDVLKSVGKYHNFSAGLLIGGRKDVEMEKERVNELNILVCTPGRLLQHMDETPNFDCTQMQMLVLDEADNILDRGFTKTVNAIISQLPKHRQTMLFSATQRKSIQDLARLSLKDPEYLSVHEESVTATPTLLRQIVMIVPLDQKLDMLWSFIKTHLSSRTLVFLATCKQVKFVFEAFKKLRPGIPLKCLHGRMKQERRIAIYSEFCEKRSVLLSTDVAARGLDFNKAVDWVIQVDCPEDVASYIHRVGRTARYKSEGKSVLFLMPSETKMLEKLEAAKIPVHLSKPNKERLQPVSDSLASLLVKYPDFQPRAQRAFVTYLRSIRIQRDKEIFDVMKLPIDEYSTSLGLPMTPKIRFLNQKNKSKALSTKPDLAEPEEDSDKEITLKIPRKKPDPSNLQEEEAEKELLLADSSDEEEGKTSEVLDAIPPATRVPKKKKLKINIHRPVGTRVVFDDEGNALPPLARIADTQSAKGTLLDPEQKAEYYRKMREELKKVDKEDKLVQRERHREKRIKEKIKWKEGNAEEDDNNISGSEGNETADRRHKKRKIYFNSDSDDGKQTEVTTNGVSDSVTLEEQEALALKLLNSMHS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0901 743 MobiDBLite consensus disorder prediction 669 723 - -
Sto7g0901 743 MobiDBLite consensus disorder prediction 28 49 - -
Sto7g0901 743 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Sto7g0901 743 CDD DEADc_DDX10 77 275 - -
Sto7g0901 743 MobiDBLite consensus disorder prediction 690 708 - -
Sto7g0901 743 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 456 IPR001650 -
Sto7g0901 743 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Sto7g0901 743 MobiDBLite consensus disorder prediction 515 574 - -
Sto7g0901 743 MobiDBLite consensus disorder prediction 709 723 - -
Sto7g0901 743 SMART helicmild6 325 408 IPR001650 -
Sto7g0901 743 MobiDBLite consensus disorder prediction 521 574 - -
Sto7g0901 743 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Sto7g0901 743 Gene3D - 284 568 IPR027417 -
Sto7g0901 743 PANTHER ATP-DEPENDENT RNA HELICASE DDX10-RELATED 57 526 - -
Sto7g0901 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 428 IPR027417 -
Sto7g0901 743 SMART DUF4217_3 447 510 IPR025313 -
Sto7g0901 743 Pfam Domain of unknown function (DUF4217) 449 508 IPR025313 -
Sto7g0901 743 Gene3D - 54 278 IPR027417 -
Sto7g0901 743 CDD SF2_C_DEAD 286 417 - -
Sto7g0901 743 Coils Coil 639 659 - -
Sto7g0901 743 PANTHER RNA HELICASE 57 526 - -
Sto7g0901 743 SMART ultradead3 85 289 IPR014001 -
Sto7g0901 743 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0901 Sto-Chr7 6950956 6957235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0901 65 429 Eukaryotic Initiation Factors Gene Family AT3G19760 28.378 5.58e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0901 K14776 - gmx:100792106 1139.41