Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0896 ATGGTGTCCGACGCGAGTAAAAAGAAGGCAGCTCAGAAGAAGGCGGCTGCCGCTGCTAAGAGAGGAGGCAAGGcggctgctgctgctgcttcaTCAAAAGCTGCGGCGGTGGATGCTCAGAAGGCCGCCGATAAGCTAGCTAATGGAGTCGGTGAAATTCATATATCCGATCGGACGTGCACCGGCGTCCTCTGCTCGCATCCTCTTTCTAGGGATATTCGGATAGAGTCTCTGTCGGTTACTTTCCATGGACATGATCTCATAGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGCTATGGTTTGCTTGGATTAAATGGCTGTGGAAAATCTACTCTTCTTACGGCAATAGGTTGTCGAGAGCTTCCAATTCCTGATCACATGGATATATATCACCTTACCCGAGAAATTGAAGCTTCTGACATGTCTGCACTGGAAGCTATCATATGCTGTGATGAAGAAAGGTTGAGATTAGAGAAAGAAGCTGAAGTTTTGGCAGCACAGGATGATGGAGGTGGCGAAGCTCTTGAACGCATTTATGAACGATTGGAAGCCATGGATGCAGCAACTGCAGAAAAGCGCGCTGCTGAAATTTTATATGGGCTTGGTTTTAACAAGCAGATGCAGGCAAAAAAGACACGCGACTTTTCTGGTGGTTGGAGAATGAGGATAGCATTAGCTCGAGCTCTATTTATGAACCCAACAATTCTTCTACTAGATGAACCAACTAATCACTTAGatttggAAGCATGTGTGTGGTTGGAGGAGAATTTGAAGAAGTTTGACCGTATCCTTGTCGTTGTTTCACACTCCCAGGATTTTCTCAATGGTGTCTGCACAAACATTATCCACATGCAGAGCAAGAAACTGAAGTCTTACACTGGTAACTATGATCAATATGTTCAGACACGTGCTGAATTGGAAGAAAACCAGATGAAGCAGTACAAGTGGGAACAGGATCAGATTGCCTCAATGAAAGAATATATTGCCCGATTCGGGCATGGATCTGCAAAATTAGCTCGCCAAGCACAGAGTAAAGAGAAAACACTGGCAAAAATGGAACGAGGTGGACTTACTGAGAAGGTTGTCAAAGACAAAGTTTTGGTATTTCGCTTTGTTGATGTGGGAAAGCTTCCTCCGCCCGTTCTTCAGTTTGTTGATGTGTCATTTGGTTACACCCCAGATAATCTCATCTACAAAAACCTTGACTTTGGGGTGGACTTAGACTCTAGGGTCGCCCTGGTTGGACCCAATGGAGCCGGGAAGAGTACACTACTGAAGCTGATGACTGGGGATCTGCTTTCTACTGATGGCATGGTCCGACGGCATAACCACCTTCGCATTGCTCAGTTTCATCAGCACTTGGCAGAAAAGCTAGACATGGAAATGTCAGCCCTCCAGTTTATGATCAAAGAGTACCCTGgtaatgaagaagagagaatgaGGGGAGCTATTGGGAAGTTTGGATTGTCAGGTAAAGCCCAGGTGATGCCAATGAAGAATCTGTCTGATGGGCAGAGGAGCCGTGTGATTTTTGCTTGGTTAGCTTGGAGGCAGCCTCACATGCTGCTTTTGGATGAGCCAACTAATCATTTAGATATTGAGACAATAGACTCATTGGCTGAGGCGTTGAATGAATGGGATGGTGGCTTGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTTTGTGCAGATCAATGTGTGACCAAATGGAACGGTGACATTATGGATTTCAAGCAGCATCTGAAGGCAAAGGCAGGTTTATCTGACTGA 1800 0.4428 MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAVDAQKAADKLANGVGEIHISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLTREIEASDMSALEAIICCDEERLRLEKEAEVLAAQDDGGGEALERIYERLEAMDAATAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQSKKLKSYTGNYDQYVQTRAELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVDVSFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLLSTDGMVRRHNHLRIAQFHQHLAEKLDMEMSALQFMIKEYPGNEEERMRGAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADQCVTKWNGDIMDFKQHLKAKAGLSD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0896 599 PANTHER - 1 599 - -
Sto7g0896 599 Coils Coil 291 311 - -
Sto7g0896 599 Pfam ABC transporter 284 360 IPR032781 -
Sto7g0896 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 317 IPR027417 -
Sto7g0896 599 CDD ABCF_EF-3 384 575 - -
Sto7g0896 599 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 599 - -
Sto7g0896 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 599 IPR003439 GO:0005524
Sto7g0896 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 578 IPR027417 -
Sto7g0896 599 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524
Sto7g0896 599 Pfam ABC transporter 400 531 IPR003439 GO:0005524
Sto7g0896 599 Pfam ABC transporter 91 245 IPR003439 GO:0005524
Sto7g0896 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 313 IPR003439 GO:0005524
Sto7g0896 599 Gene3D - 350 597 IPR027417 -
Sto7g0896 599 CDD ABCF_EF-3 73 290 - -
Sto7g0896 599 Gene3D - 73 337 IPR027417 -
Sto7g0896 599 SMART AAA_5 97 299 IPR003593 -
Sto7g0896 599 SMART AAA_5 409 575 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0896 Sto-Chr7 6900141 6903278 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0896 204 271 Calmodulin-binding Proteins AT2G36910 41.429 7.95e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0896 K06185 - gmx:100785099 1054.28