Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0894 ATGGTGTCCGACGCGAGTAAAAAGAAGGCAGCTCAGAAGAAGGCTGCTGCCGCTGCTAAGAGAGGAGAAGTTGCGGCGTTGGAGGCTCAGAAGGCTGCCGATAAGCTAGCTAATGGAGTTGGGGAAATTCAGATATTTGATCGGACGTGCACCGGCGTCCTCTGTTTGCATCCTCTGTCTAGAGATATTCGGATAAAGTCTCTGTCGGTTACTTTCCATGGACATGATCTCATAGTTGATTCTGAATTGGAGCTAAATTATGGAAGAAGCTATGGTTTACTTGGATTAAATGGTTGTGGAAAATCTACACTTCTTACGGCAATAGGTTGTCGAGAGCTTCCAATTCCAGGTCACATGGATATCTATCACCTTACCCGAGAAATTGAAGCTTCTGACATGTCTGCACTGGAAGCTGTCATAAGTTGTGATGAGGAAAGGTTGAGATTAGAGAAAGAAGCTGAAGTTTTGGCAGCACAGGAAGATGGAGGTGGGGAAACACTTGAACGCATTTATGAACGATTGGAAGCCATGGATGCAGCAACTGCGGAAAAGCGTGCTGCTGAAATTTTATATGGGCTTGGTTTTAACAAGCAGATGCAGGTAAAGAAGACACGTGACTTTTCTGGTGGTTGGAGAATGAGGATTGCCTTAGCTCAAGCTCTATTTATGAACCCAACAATTCTTCTACTAGATGAACCAACTAATCACTTAGATTTGGAAGCATGTGTGTGGTTGGAGGAGAATTTGAAGAAGTTTGACCGCATCCTGGTTGTGGTTTCACACTCCCAGGATTTTCTTAATGGTGTCTGCACAAACATCATCCACATGCAGAACAAGAAACTGAAGTTCTACACTGGTAACTTTGATCAATATGTTCAGACACGTGCTGAATTGGAAGAAAACCAAATGAAGCAGTACAGGTGGGAACAGGATCAGATTGCCTCAATGAAGGAATATATTGCCAGATTTGGGCATGGATCTGCAAAACTTGCTCGCCAAGCACAGAGTAAAGAGAAAACACTTGCAAAAATGGAACGAGGTGGACTTACTGAAAAGGTTGTCAAAGACAAAGTTTTGGTATTTCGCTTTGTAGATGTGGGAAAGCTTCCTCCGCCCGTTCTTCAGTTTGTTGATATGTCATTTGGTTACACCCCAGATAATATCATCTACAAAAACCTTGACTTTGGGGTGGACTTGGACTCTAGGGTCGCCCTGGTTGGACCCAATGGAGCCGGGAAGAATACACTACTGAAGCTGATGACTGGAGATCTGGTTCCTACTGATGGCATGGCCCGGCGGCATAACCACCTTCGCATTGCACAGTTTCATCAGCACTTGGCAGAAAAGCTAGACATGGATTTGTCAGCCCTCCTGTTTATGATCAAAGAGTACCCTGgtaatgaagaagagagaatgaGGGCAGCTATTGGGAAGTTTGGATTGTTAGGTAAAGCCCAAGTGATGCCGATAAAGAGTTTGTCTGATGGGCAGAGGAGCCGTGTGATTTTTGCTTGGTTAGCTTGGAGGCAGCCTCACATGCTGCTTTTGGATGAGCCAACTAATCATTTGGATATTGAGACAATAGACTCGTTGGCAGAGGCGTTGAATGAATGGGATGGTGGCTTGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCACATGAGATATGGGTTTGTGCAGATCAAACTGTGACCAAATGGGACGGTGACATTATGGATTTCAAGGAGCACCTGAGGGCAAAGGCAGGTTTATCTGACTGA 1770 0.4441 MVSDASKKKAAQKKAAAAAKRGEVAALEAQKAADKLANGVGEIQIFDRTCTGVLCLHPLSRDIRIKSLSVTFHGHDLIVDSELELNYGRSYGLLGLNGCGKSTLLTAIGCRELPIPGHMDIYHLTREIEASDMSALEAVISCDEERLRLEKEAEVLAAQEDGGGETLERIYERLEAMDAATAEKRAAEILYGLGFNKQMQVKKTRDFSGGWRMRIALAQALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYVQTRAELEENQMKQYRWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVDMSFGYTPDNIIYKNLDFGVDLDSRVALVGPNGAGKNTLLKLMTGDLVPTDGMARRHNHLRIAQFHQHLAEKLDMDLSALLFMIKEYPGNEEERMRAAIGKFGLLGKAQVMPIKSLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADQTVTKWDGDIMDFKEHLRAKAGLSD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0894 589 PANTHER - 1 589 - -
Sto7g0894 589 Pfam ABC transporter 274 350 IPR032781 -
Sto7g0894 589 CDD ABCF_EF-3 63 280 - -
Sto7g0894 589 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 303 IPR003439 GO:0005524
Sto7g0894 589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 569 IPR027417 -
Sto7g0894 589 Pfam ABC transporter 81 235 IPR003439 GO:0005524
Sto7g0894 589 Pfam ABC transporter 390 521 IPR003439 GO:0005524
Sto7g0894 589 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524
Sto7g0894 589 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 374 589 IPR003439 GO:0005524
Sto7g0894 589 CDD ABCF_EF-3 374 566 - -
Sto7g0894 589 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 589 - -
Sto7g0894 589 Gene3D - 63 327 IPR027417 -
Sto7g0894 589 SMART AAA_5 399 587 IPR003593 -
Sto7g0894 589 SMART AAA_5 87 289 IPR003593 -
Sto7g0894 589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 299 IPR027417 -
Sto7g0894 589 Gene3D - 339 587 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0894 Sto-Chr7 6880905 6884247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0894 83 261 Calmodulin-binding Proteins AT2G36910 28.421 1.57e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0894 K06185 - gmx:100785099 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0894 7 6880905 6884247 Sto7g0894 7 6880905 6884247 ECH