Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0878 ATGGATGTTCATCACCAAGACACTACTTCTTCTCTAATGCATATTAATAATGACTGTGAGCTTCATGACTTCATAGATGATCCCAATTTCGATCAATTCATCAACTTGCTTCGTGGGGATGATAATGAAGATTCAATCTGCAATTTTGATTCTGATCTCATCAATGGCTGCTTAGCTGATAATGATCAATTCCTTTCATTCCCTAATTCAAACCCAATATTTGAGTGTAATAATGCTTATGATCCAAGCTCTACACTTAGCTCCTTCTCTTGTTTTGATGGAGAAGTGAAGGAAGATGATGGAGGTGGGGAAGAAGAGGATGATTCTTCTGCAACAACAATCACAACCAATGAAACTACAACTATTATTAAACAGAAGCCTAAAAGTGACAGGTCCAAGACTCTGATTTCTGAGAGGAATAGGAGAGGCAGAATGAAGGAGAAGCTTTATGCATTGCGTTCTTTGGTGCCTAACATAAGTAAGGAGCTGCAAGAGAAAGCTAAGAAGCTGAAGGCTGAGGTTGCAGGTCTAGAATCATCCTTGTTAGCTTCAGAAAACTATCAAGGATCAGTTGAAACCCCCATGAAGGTTCAACACAACCTCATCAACTATCCAATCTGCAAGAAGATCATGCAGATGGACATGTTTCAAGTGGAGGAAAGAGGGTTTTATGTGAAACTGGTGAGCAATAAAGGAGAAGGTGTGGCTTCCTCACTATACAGAGCTCTTGAGTCTCTTACAGGCTTCAATATTCAGAATTCAAACTTGGCCACAATTTCTGACAGATTTCAGCTAACATTTACATTGAATGTAAAAGGTTGTCAACCAGAAATTAACCTCCCAAATTTGAAGCTGTGGATGACAGGAGCTCTTCTGAACCAATGCTTCGAATTCACTACAAATTTTCATGCTTGA 915 0.3923 MDVHHQDTTSSLMHINNDCELHDFIDDPNFDQFINLLRGDDNEDSICNFDSDLINGCLADNDQFLSFPNSNPIFECNNAYDPSSTLSSFSCFDGEVKEDDGGGEEEDDSSATTITTNETTTIIKQKPKSDRSKTLISERNRRGRMKEKLYALRSLVPNISKELQEKAKKLKAEVAGLESSLLASENYQGSVETPMKVQHNLINYPICKKIMQMDMFQVEERGFYVKLVSNKGEGVASSLYRALESLTGFNIQNSNLATISDRFQLTFTLNVKGCQPEINLPNLKLWMTGALLNQCFEFTTNFHA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0878 304 Gene3D - 120 186 IPR036638 GO:0046983
Sto7g0878 304 Coils Coil 160 180 - -
Sto7g0878 304 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 15 300 - -
Sto7g0878 304 MobiDBLite consensus disorder prediction 95 117 - -
Sto7g0878 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 185 IPR011598 GO:0046983
Sto7g0878 304 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 15 300 - -
Sto7g0878 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 171 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0878 Sto-Chr7 6702714 6704595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0878 17 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.140 2.93e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0878 - - gmx:100787584 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0878 7 6702714 6704595 Sto7g0878 7 6702714 6704595 ECH