Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0865 ATGGCTATTGCTGGACTACAAAATGTGTCTGTGTTTGACTCTTCTTTCCTTAGGGACTCCCATTCTCAATCACCCAGGAGGCGAGGCAATGGAGGGAGTGGAAGCACCCGGTCATCTTCAATCTTGCAAATGTGGCGAGAGCTTGAGGATGAGCATGTGGTGAGTCAAGCCCAAGGAAGACCTGGAGAAGGTTTGCTTCAACAAAGGAGTGATGAGTTGAGTGTGGATCTCTCACAAGCAAATACGCCAAATAGTCATGAGAGAGGACAGAGGCATGTTCTTGAAGATACAATTTTGGGTGAGAATGATTGTGAAACATGGTCACAATCACAAAGTCAGCATGAATCCCATGATGAACAGGAGGAATTAAACAATTCTAGTTGTGATAACTCTTCTGATTTTGGAGAAGTTGAAAGGGAAAGGGTGAGGCAAATTTTCAGGGAATGGATGAATACTGGTGGTAGGGATGATCACGCCTCATCAAAcatttcccaaaataataaCAGTTCAAGATCAGAATGGCTTGGTGAAACTGAGCAGGAGAGGGTCAGAATCATAAGGGAGTGGGTACAATTGAGTAGCCAGCAGAGAGTTATTTCTTCTGGGGACAACCGGGAAGAACAAACTGCTGAAATGGGTACCCAAATAGAACGTGTTCGTGATGGATTTTCTGTTAATCAGAGTGTGGGTCAAATTGAGCATACACGGAGGGGTCTTCGGAAAATATGTGGCAGACAGGTTCTGCTTGATATGCTTAAGAAGGCTGAGATGGAAAGGCAAAGAGAAGTTCAGGAATTATTGGGTCATCGTGCTGTATCTCATTTTCCCCATCGCAATCGCATTCAGGCATTGCTTAGGGGAAGGTTCTTGAGAAATGATAGATCTGTTGATATCAATAGGTCCACTTCTATAGCTGAAAGTGAATTAGGCTTATTGAGGCAAAAACAGACTGTATCAGGTCTAAGGGAAGGATTTTTCTCAAGAAAGGATGATTCTGGTGGCAGTCAAGTAACCTGCAACATGTCTGATACCTCATCTAACAGTGGCATTGATGCTAATTCAAATGAACAAACTGAAGCCAGCAGTTTACAAACGGTCCCATCTGTACATTTTAATCAGTCTGAGCCTAATGACAGAGGAGGTGATAGATTTGGGATCTCGGATGATCAGAATTGTATACAAGGAACCATAATTGAGAATTTAGATTGTCCAAACTCTGCTGCTCATGTAGAATCAAGAGATTGTCAATCATCATCCAGTGTTGAGATGGGGAGAAGAGATGGCAGTGGACAAAATATTGTTGGGATGACAATTGAGAATACTGCTATTGAACTCATGcaacaaaattttcaaagtgAACATACAGAACATAGCGTTATGCATGAATTAAGTGAGGCATATCATGAACAAGCTGAGCTGACTagtaatgatgatgatggtttATCAACTCATAGTAATGATATGGAAGGCAATATGGTTGTTGACGAAAATAGGAATGAATCTACTTCCCTGGAAGGACAGCAGCAGGAAGAACTTATAGAAAATGAAGGAAGTGATGGGCATCAATCTAATGTTGAATGGAGAAATAGCACAGAGGAAAGTGTGGATGACAATCCCATCAGTGGTACAGCCAATGAGTGGCCTCAAAACATTTTGAGCAATGAAGATGGGGAAAACTCTCATCCTCCTGAAGTCCCTGAAATATGGCAAGAAGATGGTGGCTTTCAGGAGGCTGTGGAAAATTGGTTGGGTGGACCTTCTGATCATGAAGTTGCTCCAGTTGGTAGAATTCATGGATTTTATTTCCCTGATGATGACAATGTGAACAGCGTGGAACTCAGGGAACTGCTAAATAGGAGAAGTGTCTCTAACCTGCTTCGCAGCAGCTTCCGCGATAGTCTTGACCAATTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCATGTTGAGTGGGAGCTGCAAGAAACAATCCCTTCTTCTGCCTCTGTGGAACAGGACCTGGAGCAGCAGAACAGGGATCAGATTGTTGGTCAGGAGCATGCTATCAACAGTCCACTTGACCAACCGTCATCTCCAGCACGTCCTCAGCCTGTCTGGGAACGGCAGTCACATCATGACAACTGGCCTCAGGCTGACATGAATAATCAGCGGCTAGGAATTGAGTGGGAGATCGTCAATGACTTGAGAATTGACATGGCCAGGCTACAGCAAAGAATGAACAATATGCAGAGAATGCTGGAAGCCTGCATGGATATGCAGCTTGAGTTGCAGCGCTCCATTAGACAAGAAGTTTCTGCTGCCCTAAATCGCTCAGCTGGTTCTTCAGAAATGCATGATCATGATTCGCCAGACGATAAGTCTAAGTGGGAATGTGTAAGAAAAGGGCTTTGCTGTATATGCTGTGAGAGCAATATCGATTCTTTGTTGTACAGATGCGGGCACATGTGCACGTGTTCAAAATGTGCTAATGAGTTGTTCCAAAGTGGGAGAAAATGCCCAATGTGTCAAGCACCTGTGGTGGAGGTGATACGTGCCTATTCTATACTATAA 2553 0.4285 MAIAGLQNVSVFDSSFLRDSHSQSPRRRGNGGSGSTRSSSILQMWRELEDEHVVSQAQGRPGEGLLQQRSDELSVDLSQANTPNSHERGQRHVLEDTILGENDCETWSQSQSQHESHDEQEELNNSSCDNSSDFGEVERERVRQIFREWMNTGGRDDHASSNISQNNNSSRSEWLGETEQERVRIIREWVQLSSQQRVISSGDNREEQTAEMGTQIERVRDGFSVNQSVGQIEHTRRGLRKICGRQVLLDMLKKAEMERQREVQELLGHRAVSHFPHRNRIQALLRGRFLRNDRSVDINRSTSIAESELGLLRQKQTVSGLREGFFSRKDDSGGSQVTCNMSDTSSNSGIDANSNEQTEASSLQTVPSVHFNQSEPNDRGGDRFGISDDQNCIQGTIIENLDCPNSAAHVESRDCQSSSSVEMGRRDGSGQNIVGMTIENTAIELMQQNFQSEHTEHSVMHELSEAYHEQAELTSNDDDGLSTHSNDMEGNMVVDENRNESTSLEGQQQEELIENEGSDGHQSNVEWRNSTEESVDDNPISGTANEWPQNILSNEDGENSHPPEVPEIWQEDGGFQEAVENWLGGPSDHEVAPVGRIHGFYFPDDDNVNSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVERQGHAHVEWELQETIPSSASVEQDLEQQNRDQIVGQEHAINSPLDQPSSPARPQPVWERQSHHDNWPQADMNNQRLGIEWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSEMHDHDSPDDKSKWECVRKGLCCICCESNIDSLLYRCGHMCTCSKCANELFQSGRKCPMCQAPVVEVIRAYSIL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0865 850 MobiDBLite consensus disorder prediction 151 176 - -
Sto7g0865 850 SUPERFAMILY RING/U-box 797 843 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 331 375 - -
Sto7g0865 850 Pfam Zinc finger, C3HC4 type (RING finger) 795 842 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 325 387 - -
Sto7g0865 850 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 849 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 17 39 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 72 91 - -
Sto7g0865 850 Coils Coil 726 753 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 155 174 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 72 87 - -
Sto7g0865 850 CDD mRING-HC-C3HC5_NEU1 798 836 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 413 432 - -
Sto7g0865 850 ProSiteProfiles Zinc finger RING-type profile. 798 837 IPR001841 -
Sto7g0865 850 MobiDBLite consensus disorder prediction 105 136 - -
Sto7g0865 850 MobiDBLite consensus disorder prediction 682 713 - -
Sto7g0865 850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 773 848 IPR013083 -
Sto7g0865 850 MobiDBLite consensus disorder prediction 498 543 - -
Sto7g0865 850 PANTHER PROTEIN, PUTATIVE-RELATED 1 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0865 Sto-Chr7 6603034 6606809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0865 798 844 C3H Transcription Factor Family AT3G06140 40.426 3.19e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0865 - - gmx:100801329 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0865 7 6603034 6606809 Sto12g0360 12 2255247 2259466 CCT
Sto7g0865 7 6603034 6606809 Sto7g0865 7 6603034 6606809 ECH
Sto12g0360 12 2255247 2259466 Sto7g0865 7 6603034 6606809 ECH