Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0851 ATGTCTCGTCGCGGTGGCGGAAGGCAGCCTGAAACGCGCCGGGATCAACCGTCTCCGGCGTCGTCACAATCCGCGTACGGTCGAGGTCGTGGCGGAGGTCGCTCGCGAGGGGGACCTGGACGTGGTGGACCTACTAATGTTCCAGTCTCTACTCATGCGACGGCGCCGGCACCGGCGTCGTATGGTTCTCCTGCTCCGGCGCCGGCTTCGTCTTCGTCTTCGGCGTCGTCTGTTCCTCCTGCTGCTGTTAGTACTCCGCCGGTGACTACGGATGCTCCGTCGCTTGGTTCGGCTTCGACTTCCAAAGATGTTCCGGAGATTGAGAAGCTCTCATTGCAGCCTTCGGCGCCTTCGTCAACGAAGGCCGTTAGATTTTGTGATCGCCCTGGATTTGGTAGAATCGGGAGAAAACTTCATGTTCGCGCGAACCATTTCCTTGTTGATGTTGCTAACGGAGATTTCCACCATTATGATGTATCCATAACACCAGAAATTACTTCAAAAAAGATCAATAGAATGGTGATGAGTCAATTAACCCAGTTGTACCTCGAGTCACACTTGGGTAAGCGTATACCAGCCTATGATGGTCGGAAGAGTCTTTATACAGCTGGTCCATTGCCATTTTCTTCCAAAGAATTTGTGGTCAAGCTGGTAGACGATGAAGAACATGGCAAATCTTCTGGTTCAGCTAGAAAGAAACGTGAACGGGAGTTCAAGGTCACAATCCGTTTTGCTTCTAAGCCTGACCTACATAGTTTGCATCAGTTTATCAAACGGTTACACCTTGAGAGTCCGCAGGAAACCATACAAGCTCTCGATGTTGTTCTTAGGGCATCACCTTCTGAAAAGTATACAGTTGTAGGGAGGTCTTTCTTCTCACCCACTTTGGGCCCAACGGGTGAGCTCGGGGATGGAATAGAATATTGGAGAGGATACCATCAAAGCCTTCGACCCACACAGATGGGGCTTTCCCTCAACATTGATGTATCAGCCAGATCATTCTATGAGAACATCTTCGTGACAGATTTTGTTGCAAAAcattttagatttaatttttCGAGGCCACTGTCTGACCAGGACCGTGTCAAGGTTAAGAGAGCCTTGAAAGGTATTAAGGTAGAATTAACACACGGTCAGTACACCAAAAGCTACAAAGTGACGGGAGTAACAAAAGAACCTCTCAGTCAGTTAACGTTTCCTGTTGATGACACGACTCAAATGTATGTTGTTCAATATTTTCGTGAGAAATACAATGTCGTGCTTGAGTGTTTGGCTCTTCCGGCCCTTCAAGCTGGCAACGACACTAAGCAAATATATTTGCCTATGGAGCTATGTAAAATATCTGCAGGACAAAGGTACTCCAAGAGATTGAATGAGAGACAAGTATCTAATCTTTTAAGAGCAACCTGTCAGCGACCTAATGAGAGGGAAAGAGACATTAGAGGGATGGTTCGGCAGAACAATTTCAACGGAGACAAGCATGCGCATGAATTTCGAATTCAAGTGAGGGAAGAACTTTCCCTTTGTGAGGCAAGGGTTCTGCCTCCACCCATGCTAAAGTATTATGGTACTGGTAAAGAATCAAGTATCGAACCCTCCACTGGTCAGTGGAATATGATAAACAAGAGAATGATTAATGGTGGCACAGTGGAATATTGGACGTGTCTCAACTTCTCTACTAGATTGGATCGAAATTTGCCTTCCCAATTTTGTAATGGTGTAGTTGAAATGTGTATTAACAAGGGAATGGATTTCAACCCAAAACCATTTCTTCCTATAAGGTCAGCAACGCCAAATCAGTTAGAGAAAGCTCTTGTTGATGTTCACAAGCAGTCTCAGGGGAAATTGCAGTTGCTGATTATAATCTTGCCTGATGTCAAAGGAAGGATAAAACGCATTTGTGAAACTGAGTTGGGAATAGTTACTCAATGCTCTCAACCCAAGGAGGCTTCAAAACTTTCTAAACAATATCTTGAAAATTTGGCCCTCAAGATTAATGTCAAGGTTGGTGGGCGAAACACTGTGTTACAAGATGCAATTAATAGAAGAATTCCTCTTGTGACTGATCACCCTACAATAATCTTCGGTGCGGATGTAACACATCCTCAGCCAGGGGAGGACTCAAGCCCTTCTATAGCAGCTGTTGTAGCTTCCATGGATTGGCCGGAAATTACCAAGTACAGGGGAGTTGTGTCTGCACAAGCTCATCGACAAGAGATCATTCAAGATCTCTACAAGTCTACACAGGATCCCCAAAAAGGAATAGTACATGGTGGAATTATAAGGGAGCTCTTGGTAGCATTTTATAAATCAACCAAATGTAAGCCTGCAAGAATCATATTCTACAGAGATGGAGTAAGTGAAGGGCAATTTAGTCAAGTTTTGCTTTATGAGATGGAAGCAATAAGAAAGGCTTGCGCCTCGTTACAGGAAGGATATTTACCACGAGTAACCTTTGTGGTGGTACAGAAAAGGCATCACACCCGTTTCTTTCCTGTAGATAACCGTCAGACGGATAGAAGTGGAAATATTCTGCCAGGAACTGTTGTGGATACACAAATTTGCCACCCCAGGGAATTTGATTTTTACCTCAACAGCCATGCTGGAATTAAAGGAACTAGCCGGCCTACTCACTACCATGTTCTATTTGATGAAAACAAATTTAGTGCTGATCAATTGCAGACTCTGACAAATAATCTCTGTTACACATATGCAAGGTGTACTCGGTCAGTTTCCATAGTTCCTCCTGCTTATTATGCACACTTGGCTGCTTTCCGAGCTCGGTACTACATCGAAGGTGAGGCATCGGATGTTGATACTGGAAGCGGAAGTGGGATAAGAGGTAGGAACATTGAGATAACCCTCCCATCAGTCAAGGAGAATGTCAAAGATGTTATGTTTTACTGTTGA 2910 0.4467 MSRRGGGRQPETRRDQPSPASSQSAYGRGRGGGRSRGGPGRGGPTNVPVSTHATAPAPASYGSPAPAPASSSSSASSVPPAAVSTPPVTTDAPSLGSASTSKDVPEIEKLSLQPSAPSSTKAVRFCDRPGFGRIGRKLHVRANHFLVDVANGDFHHYDVSITPEITSKKINRMVMSQLTQLYLESHLGKRIPAYDGRKSLYTAGPLPFSSKEFVVKLVDDEEHGKSSGSARKKREREFKVTIRFASKPDLHSLHQFIKRLHLESPQETIQALDVVLRASPSEKYTVVGRSFFSPTLGPTGELGDGIEYWRGYHQSLRPTQMGLSLNIDVSARSFYENIFVTDFVAKHFRFNFSRPLSDQDRVKVKRALKGIKVELTHGQYTKSYKVTGVTKEPLSQLTFPVDDTTQMYVVQYFREKYNVVLECLALPALQAGNDTKQIYLPMELCKISAGQRYSKRLNERQVSNLLRATCQRPNERERDIRGMVRQNNFNGDKHAHEFRIQVREELSLCEARVLPPPMLKYYGTGKESSIEPSTGQWNMINKRMINGGTVEYWTCLNFSTRLDRNLPSQFCNGVVEMCINKGMDFNPKPFLPIRSATPNQLEKALVDVHKQSQGKLQLLIIILPDVKGRIKRICETELGIVTQCSQPKEASKLSKQYLENLALKINVKVGGRNTVLQDAINRRIPLVTDHPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEITKYRGVVSAQAHRQEIIQDLYKSTQDPQKGIVHGGIIRELLVAFYKSTKCKPARIIFYRDGVSEGQFSQVLLYEMEAIRKACASLQEGYLPRVTFVVVQKRHHTRFFPVDNRQTDRSGNILPGTVVDTQICHPREFDFYLNSHAGIKGTSRPTHYHVLFDENKFSADQLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEASDVDTGSGSGIRGRNIEITLPSVKENVKDVMFYC 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0851 969 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 948 - -
Sto7g0851 969 SMART Piwi_a_2 618 932 IPR003165 GO:0003676
Sto7g0851 969 Gene3D - 513 678 - -
Sto7g0851 969 SUPERFAMILY PAZ domain 334 490 IPR036085 GO:0005515
Sto7g0851 969 MobiDBLite consensus disorder prediction 65 106 - -
Sto7g0851 969 MobiDBLite consensus disorder prediction 1 106 - -
Sto7g0851 969 Pfam PAZ domain 363 466 IPR003100 GO:0005515
Sto7g0851 969 SUPERFAMILY Ribonuclease H-like 612 932 IPR012337 -
Sto7g0851 969 Pfam Argonaute linker 1 domain 287 336 IPR014811 -
Sto7g0851 969 Pfam Piwi domain 628 931 IPR003165 GO:0003676
Sto7g0851 969 ProSiteProfiles Piwi domain profile. 618 932 IPR003165 GO:0003676
Sto7g0851 969 SMART DUF1785_2 285 337 IPR014811 -
Sto7g0851 969 Gene3D paz domain 337 452 - -
Sto7g0851 969 CDD PAZ_argonaute_like 340 447 - -
Sto7g0851 969 Pfam N-terminal domain of argonaute 136 276 IPR032474 -
Sto7g0851 969 Pfam Mid domain of argonaute 532 610 IPR032473 -
Sto7g0851 969 PANTHER PROTEIN ARGONAUTE 1A 55 948 - -
Sto7g0851 969 SMART PAZ_2_a_3 342 471 IPR003100 GO:0005515
Sto7g0851 969 CDD Piwi_ago-like 493 931 IPR045246 -
Sto7g0851 969 Pfam Argonaute linker 2 domain 475 521 IPR032472 -
Sto7g0851 969 Gene3D - 684 969 IPR036397 GO:0003676
Sto7g0851 969 ProSiteProfiles PAZ domain profile. 338 449 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0851 Sto-Chr7 6461774 6467680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0851 63 969 Eukaryotic Initiation Factors Gene Family AT1G48410 58.466 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0851 K11593 - rcu:8275276 1254.2