Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0849 ATGGCGGAGGACCGCAACGGCGAGAGGAATGACAACAGTGATTACACGTCGGAGGACGAAGGAACTGAGGATTACAGGCGAGGAGGTTATCATGCGGTTCGAATTGGGGATACTTTCAAAAATGGGTGCTATGTGGTTCAGAGCAAGCTTGGGTGGGGTCATTTTTCTACTGTCTGGCTTGCTTGGGATACCCAAAGATCGCGGTATGTAGCCCTAAAAATTCAAAAGAGTGCTGAACACTATACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATAGCAGAGGGAGACCTAGAAGACAAGAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAACGGTCAGCATGTGTGTATGGTTTTTGAATTTCTTGGCGATAATCTTTTGACGCTTATCAAGTATAGTGATTACCGAGGGGTTCCTCTCCCCATGGTTAAAGAAATTTGTTACCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCCATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTATGATAGATCCATCTAAGGATCACAGGAAGTCAGGCGCCCCTCTTGTCCTTCCTGGCACCAAGGATAACCCTGCATTGAAGAATGAGGTCACAAAAGACAATGTTAGTTTGAATGGAGATCTGACCAAGAATCATAAAAAGAAAACGCATAGAAAGGTTAAGAGGGTTGAGAATGAAATCACCGATGAAGTTGAGGAGGATTCTAAAGAGCATGACCGAGAAGATTCTAGTAATGATCTAAAACCAAATGCTGAATCTGTTCAAGATAAGCCCAATTGTTCTGCGAATAAAGATGTATCAACAAAGATTGTTGAAACTAAGGATGTTGCGCAAGGAAGTCACAGTCAGAGGAAAAGTAGCCGTTCCATGAGAAAGAAGTTGCTTGCAGGTGTCGATCTTAAGTGCAAGCTAGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACGAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGGTCTAAATACTCAACTCCAGCAGATTTATGGTCTTTCGCTTGTATTTGCTTTGAGCTTGCTACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCACTTGGTGGTCGCTATTCACGAGAATTTTTCAATAGATATGGTGATCTGAGGCACATTCGTCGGTTGCGTTTCTGGCCCCTTACTAAGGTGCTGATGGAGAAGTATGATTTCAGTGAGCAAGACGCAAATGACATGGCTAACTTCCTCATTCCTATACTTGATTTTGTCCCTGAAAATAGGCCAACGGCTGCTCAGTGCCTTAGTCATACATGGTTCAGTGCTGGTCCTCGGATTCAACAGCCCTCAGTGACTACTGCACAACCGGAGGCCACAGACAAGGGAATGTCTGAAAAAGCGAAGCAGGATAAGGCTGAGCAGGAGGCAGTGGAAGTTGGTGTGGGAAATATAGCCATTGATGGAACTCCAAAGTCACTCCAAGTGTCTCAAtctaaaatgataaattag 1629 0.4297 MAEDRNGERNDNSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAEHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICYHILVGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDHRKSGAPLVLPGTKDNPALKNEVTKDNVSLNGDLTKNHKKKTHRKVKRVENEITDEVEEDSKEHDREDSSNDLKPNAESVQDKPNCSANKDVSTKIVETKDVAQGSHSQRKSSRSMRKKLLAGVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLTKVLMEKYDFSEQDANDMANFLIPILDFVPENRPTAAQCLSHTWFSAGPRIQQPSVTTAQPEATDKGMSEKAKQDKAEQEAVEVGVGNIAIDGTPKSLQVSQSKMIN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0849 542 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Sto7g0849 542 PANTHER SERINE KINASE-LIKE PROTEIN 11 538 - -
Sto7g0849 542 MobiDBLite consensus disorder prediction 193 282 - -
Sto7g0849 542 SUPERFAMILY Protein kinase-like (PK-like) 39 488 IPR011009 -
Sto7g0849 542 SMART serkin_6 44 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0849 542 CDD STKc_SRPK 33 480 - -
Sto7g0849 542 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 538 - -
Sto7g0849 542 MobiDBLite consensus disorder prediction 289 308 - -
Sto7g0849 542 ProSiteProfiles Protein kinase domain profile. 44 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0849 542 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Sto7g0849 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Sto7g0849 542 Coils Coil 231 251 - -
Sto7g0849 542 MobiDBLite consensus disorder prediction 1 23 - -
Sto7g0849 542 MobiDBLite consensus disorder prediction 239 265 - -
Sto7g0849 542 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0849 542 Pfam Protein kinase domain 317 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0849 542 Gene3D Transferase(Phosphotransferase) domain 1 127 481 - -
Sto7g0849 542 MobiDBLite consensus disorder prediction 266 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0849 Sto-Chr7 6428495 6431365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0849 1 539 EF-hand Containing Proteins AT5G22840 67.279 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Sto7g0849 Pkinase 3.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0849 K08832 - gmx:100791829 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0849 7 6428495 6431365 Sto12g0369 12 2330181 2333424 CCT
Sto7g0849 7 6428495 6431365 Sto7g0849 7 6428495 6431365 ECH