Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0830 ATGGAGCCTCCAGTTCCCAGACCGAGGGGTCGGCCGAGGAAACGGAGGAGAAAGGAGGATAAGAATGGTTTGAGATCGGGTCCTGAAATTAAAAAGCAAGCTATTGAGACAAGATCAATTGCGTTGGTTGGACGGTATGTACTGAAAGAGTTCCGAGGAAGTGGGGTTTTTCTTGGGAAGGTTGTATATTACGATTGTGGATTGTACAGAATCAATTACGAGGATGGTGATTCTGAGGATTTAGATAGTAGTGAGATTCGAGGAATGCTTCTTGATGACAGTTACTTAGACGATGATTTGACTCAAAGGAGGATTGAGTTGGATGATTTAGTCTTGAAGATTAGTGTAAATGTCAGAGGTGGCTTTGGTAAGAGTTCTGATGGCCCAAACAAAGATGGATGCGGGGTTGAGCCATCTGTATCTAGTGGAGGTGGGTTATCAAGTGAAAATGGCGAGGAACAAGTTGAAGGAGATGCTGATTCATCAAGTGGCTCATGCTTGGGTTCAAAGGAAAGAGATTTTGGGTCTGATGCTGAGACACCGCCTATACCTCCGTTGCAGTTGCCACCGTCTTCTGGAACAATTGGCATCCCGGAGCCATATGTCTCACACCTCTTTTCGGTTTATGGATTTTTGCGATCATTCAGTACTCGCCTGTTTCTAGGCCCATTTTCTTTGGATGAGTTTGTTGGTTCTCTTAACTGCCGAGTTTCAAACACGTTGTTTGATGCCATTCATGTTTCTCTAATGCGTGCATTGAGCCGTCATCTTGAATTCCTTTCATCAGAGGGCTCAGAGGTTGCATCAAAATGCTTAAGGTGCAATGACTGGGGCTTGCTTGACATATTGACTTGGCCTGTTCTTTTGATTCAGTATTTAGCAATTAATGGAAATACAAAGGGAGATGAATGGAAAGAATTTTGTGATGACATTTACAATGGCGAGTATTATTTATTATCTGCGAGCAGGAAGTTAATTATATTACAAAGTCTCTGTGATGATGTTTTGGAGTCTCAGGAACTAAAAGCTGAAATGAACATGCGTGAAGAATCAGAAACTGGGATGGATTATGATGAAGAAGATATCCTTCCTGCAGATAAAGTGTCAAGAAGAGTCCATCAACCATATGCCCAAATTTCTGCTTGCAAGCATAAAGAAGCTATGAGTCTTGCTTCAAAATCAACTGCTGAGAAGCTATTCGGTAACTCAATTTCATATTTCAGGGATGCTGAAAGGACTGAGGATGCTGATGTTGATGGAAATGGAGATGAATGTCGCCTCTGTGGCATGGATGGAATCTTACTTTGTTGTGATGGATGTCCCTCTGTATATCATTCAAGGTGTATTGGTTTGATGAAAATATCTATACCAGAAGGGTTGTGGTATTGTCCAGAGTGTAAAATTAATATGTCAGGGCCCAAGATTGAAAAGGGAACATCGCTTAGAGGGGCCGAAATATTTGGAAAGGATTTGCATGGACAACTCTTCTTGGGTGCTTGTGACCACTTACTGGTGCTCAATGTCAGTGGTGGATATTGTATCAGATATTACAATCAGAATGATATTCCAAAAGTTCTTCAAGCACTGTACGCATCCATACAGCATAGACCCATATACCACGGTATTTGCTTGGCAGTTTTACAATGTTGGAATATTCCAGAAAGTGTCTTGCCTCTTTCTCATACAAGTGAGACATACGTAAATTCAGAAGATAGTAATGAAGATGCAAAGTTCTCTAGTTCATTACTTCCCTCCTCGGGTGTAGAAGGACTTGAAGCTGTCAACTTGGTGAAGCCAGATCACTCTGTAACCACTATTGCACCATCTCTTGATGCCTCATTGCTTACCACTGAAAGAGAGACTCTCGCTCCTGAAAGCAGTAGCAACTGTAGAGCTAGGGAGTGCCCTCCAATGAATATGAAGCTTCCGGTGGAAACTAGGATGGAGTCAATTGTCTCAGTGGGTTCTGTTATCCATCAGTCTGACATAAACTGTCAAAATTCTGTTGATAGGCCAAGTGCAGTAGATCCTGCTAATTGCACCTTGGTAAATAGCCGTTATAGTTATTTTGGCCATGTAAATGATTTGGGCTTGCCCATAAATTTGTCCTCCCAAATTAAAGAAGTCAACCAATCTGGTTCTGGGAAGTCTGAAGGCAATTCAGCTAACAATTTTGTATACATGGGTTGCACCTTTAAACCTCAGTCATACATTAATTACTATATGCATGGTGATTTTGCTGCATCTGCTGCTGCTAAATTGGCTATTCTTTCTTCAGAAGATTTTAGGTCAGAGAGTCATGTGTCAGACAGTCAGAAGAAAGTGATATCTGCAAACAATTATTTGCAAGCAAAAGCATTCTCCTTAACAGCTTCACGCTTCTTTTGGCCTAGTTCTGAAAAGAAGCTTGTAGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCTCCTGTTTCAAGCAAAAAAGGATGTATGCTAAATCATGCTGCTTTAAGTGCCACCAAAAGTGCTATGAAAATCCTTGCTGGTCTTCGTTCTGTAAGGCCTGGGGAGGGAATTCTTCCGAGGATTGTAACATACATTGTATACATGGAGGAAAGTTTACGTGGTTTGATAGTTGGGCCCTTTCTAAGTGCAAATTATAGAAAGCAATGGCGTCTTTGTGTGGAAAATGTGACGACATTCAATGCTCTAAAGCCACTTTTGCTTGAACTTGAGCAGAACATTCGTACAGTTGCTTTTTCTGGGGACTGGGTTAAGTTGATGGATGATTGGTTGGCTGAATCTTGTATGATTCAAAGTGCTGCATGCAGTGTTGGAACAACACAGAAGCGTGCACCAAGTGGTAGGCGTTGCAAGAAACAGTCAGCTATTGTGGAAGTTAGAGCTGATGGATGTCACGAAAACAACTTTGCCTGGTGGCATGGTGGGAAACTTACCAAGTTTATATTCCAGAAAGCAGTTTTGCCAAAATCCATGGTCAGAAAAGCAGGTCGCCAAGGTGGGTTGAGGAAAATTTCTGGTATTTTCTATGCTGATGGCTCTGAAATTCCTAAAAGAAACAGACAGTTTGTTTGGAGAGCTTCAGTTCAAATGAGTAGGAACGCATCACAGCTAGCACTTCAGGTTAGATACCTAGATTTTCATCTTAGGTGGAGTGATCTGATTCGGCCTGAGCAGAACCTCCAGGATGGGAAAGGTCAAGAGTCTGAAGCTTCTGCTTTTAGAAATGCAATTATATGTGATAAAAAACTAGTTGACGGAAAAATTTGTTATGGAATTGCTTTTGGGAGCCAAAAGCATCTTCCTTCTCGTGTCATGAAAAATGTTATTGCAGTAGAGCAAGGTCTGGAAGGAATGGAAAATTATTGGTTTTTGGAAGCATACGTTCCCTTATATTTGGTAAAAGAGTATGAAAAAGCTAAACACTTTGTGCCATCTGATAAAGAGCACATAAATTTGACATCTCAGTTGCACAGAAGGCAGTCGAAATTCTCAAGCaaggatatatttttttatctcaccTGCAAAAGAGACAAGTTGGATATTTTATCATGTTCTGTATGCCAGCTGGCCGTTTCAGTCAGGAATGCTTTTAAATGCAGTACATGTCAAGGTTATTACCATGATCACTGTTCCATAAGTTCAGACTCTACTAACAATGATGTTGAGTTTATGACCACATGCAAGCGATGTTATTGTTCCAAATTGCTAACTCAAAAAGAGACCAGCAACAAATCTCCAATCAGTCCCTTTCTCTTACAAGAACAAGAACCTAGATCTGTGACAGTTTTGAAGAGGCAAAGGGCTCCTTGTTATGATCAGACATTGACATCTACCAGGACAGAGGATATTTGTCCTGTCATGAAACAAGGTGCTTCTGAGTCCACTTTGGCAACAAAAAGCCGTCGCAGTTCTTGTTCTTGGGGCATTATATGGAAAAAGAAGGGTAGTGAAAATACAGGCATTGATTTCAGGCTTAGAAACATACTTTTAAAGGGAAGCTCTGGTGTGCCTCAATTGGAACCTGTTTGTTATTTGTGTCGAAAGCCTTATAGTTCTGATCTGATGTATATATGCTGTGAGACATGCAAAAATTGGTATCATGCTGAAGCTGTTGAACTTCAAGAGTCAAAATTTCTTGACGTGTTGAGCTTTAAGTGTTGCAAGTGTCGCAGGATAAAGTCACCTGTCTGTCCTTACTCTGATATGAAGTACCGGATGCATGAGGGCAATAAGACACACAGAAGGGCTTCACAAAAAAAGCATTTGGGAGTTGCTTCTGATTCTGGAACTCTCTCCATATTGAAAGAGCGTGAACCTGCTACTCCATTCTCTCCCTTTGAGGATGCCTTCAGTAAAGATAGTGGTACTCAGCTTTTCCCTCGTTCAAGTGTTCAGCTAATTATAGAACCAAAATTGCAAGTGAATGGTGAACTGAATGCTGTCTCTGGTCAAGGGCCTAAGAAATTACCAGTTAGAAGGCATATTAAGCAAGACGGGGATGGTTGTGATTCTTTTGAAAGTAAACTTACAGACCCAGAATTTATAACACACAATGGAACAAGTATTCTCTCCAAACCAGCAGAGAAAGCATCATCTCCATCAGTGGAATATGACTCTGCTGTTCAACTTGACAGAAATCTGCTAAATGACTGTGAAAGTGCGAAAAATGATCACATTGAGTTTGAACCCCATACCTACTTCTCCGTGACAGAATTCTTGCCCCAAGATGATAGTCTATTTCAGGGAGCCAATGCATCTGGGATCTTGCCAGAATTTTTAGAAAATTCTCATGCACTGGAAGGTGTTCCTGAGTGCAGAACTGGTAGTTTAGTTAATAAATCGAAACTTGGAAATTCCTTACAAGGCAGTGCTTATAATTGTCGGCAATGTTCACTGAAAGAACCTGCCCCTGATCTATCTTGTGAGATTTGTGGGCTTTGGTTTCACAGTCAATGCTCCCTTTCAGTTGAATTGCCATCTAGCTTGGGAAACTGGAGAGGTGTTTCTGAGTTCAACATTGACAAGGCAGTTTTAGCAGCAATTACCATGGGCAAGTTGAATGCGTATGCTTTTGATGTGGGGCTTGATTGCTTATTTTGTGCGCTTTTCAAGCTGTTTCTGTGCGAGGCAATATCTTACATGCTATCAGGGTCCCCGGAAGCAACTGTCATTCGGAGCTGGGTCCTGTCTGCTGGATCAGTTTCAATTCGTATCTGa 5232 0.4125 MEPPVPRPRGRPRKRRRKEDKNGLRSGPEIKKQAIETRSIALVGRYVLKEFRGSGVFLGKVVYYDCGLYRINYEDGDSEDLDSSEIRGMLLDDSYLDDDLTQRRIELDDLVLKISVNVRGGFGKSSDGPNKDGCGVEPSVSSGGGLSSENGEEQVEGDADSSSGSCLGSKERDFGSDAETPPIPPLQLPPSSGTIGIPEPYVSHLFSVYGFLRSFSTRLFLGPFSLDEFVGSLNCRVSNTLFDAIHVSLMRALSRHLEFLSSEGSEVASKCLRCNDWGLLDILTWPVLLIQYLAINGNTKGDEWKEFCDDIYNGEYYLLSASRKLIILQSLCDDVLESQELKAEMNMREESETGMDYDEEDILPADKVSRRVHQPYAQISACKHKEAMSLASKSTAEKLFGNSISYFRDAERTEDADVDGNGDECRLCGMDGILLCCDGCPSVYHSRCIGLMKISIPEGLWYCPECKINMSGPKIEKGTSLRGAEIFGKDLHGQLFLGACDHLLVLNVSGGYCIRYYNQNDIPKVLQALYASIQHRPIYHGICLAVLQCWNIPESVLPLSHTSETYVNSEDSNEDAKFSSSLLPSSGVEGLEAVNLVKPDHSVTTIAPSLDASLLTTERETLAPESSSNCRARECPPMNMKLPVETRMESIVSVGSVIHQSDINCQNSVDRPSAVDPANCTLVNSRYSYFGHVNDLGLPINLSSQIKEVNQSGSGKSEGNSANNFVYMGCTFKPQSYINYYMHGDFAASAAAKLAILSSEDFRSESHVSDSQKKVISANNYLQAKAFSLTASRFFWPSSEKKLVEVPRERCGWCLSCKAPVSSKKGCMLNHAALSATKSAMKILAGLRSVRPGEGILPRIVTYIVYMEESLRGLIVGPFLSANYRKQWRLCVENVTTFNALKPLLLELEQNIRTVAFSGDWVKLMDDWLAESCMIQSAACSVGTTQKRAPSGRRCKKQSAIVEVRADGCHENNFAWWHGGKLTKFIFQKAVLPKSMVRKAGRQGGLRKISGIFYADGSEIPKRNRQFVWRASVQMSRNASQLALQVRYLDFHLRWSDLIRPEQNLQDGKGQESEASAFRNAIICDKKLVDGKICYGIAFGSQKHLPSRVMKNVIAVEQGLEGMENYWFLEAYVPLYLVKEYEKAKHFVPSDKEHINLTSQLHRRQSKFSSKDIFFYLTCKRDKLDILSCSVCQLAVSVRNAFKCSTCQGYYHDHCSISSDSTNNDVEFMTTCKRCYCSKLLTQKETSNKSPISPFLLQEQEPRSVTVLKRQRAPCYDQTLTSTRTEDICPVMKQGASESTLATKSRRSSCSWGIIWKKKGSENTGIDFRLRNILLKGSSGVPQLEPVCYLCRKPYSSDLMYICCETCKNWYHAEAVELQESKFLDVLSFKCCKCRRIKSPVCPYSDMKYRMHEGNKTHRRASQKKHLGVASDSGTLSILKEREPATPFSPFEDAFSKDSGTQLFPRSSVQLIIEPKLQVNGELNAVSGQGPKKLPVRRHIKQDGDGCDSFESKLTDPEFITHNGTSILSKPAEKASSPSVEYDSAVQLDRNLLNDCESAKNDHIEFEPHTYFSVTEFLPQDDSLFQGANASGILPEFLENSHALEGVPECRTGSLVNKSKLGNSLQGSAYNCRQCSLKEPAPDLSCEICGLWFHSQCSLSVELPSSLGNWRGVSEFNIDKAVLAAITMGKLNAYAFDVGLDCLFCALFKLFLCEAISYMLSGSPEATVIRSWVLSAGSVSIRI 1743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0830 1743 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 303 346 IPR028942 -
Sto7g0830 1743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 490 IPR013083 -
Sto7g0830 1743 ProSitePatterns Zinc finger PHD-type signature. 425 466 IPR019786 -
Sto7g0830 1743 Pfam DDT domain 202 255 IPR018501 -
Sto7g0830 1743 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 2 1672 - -
Sto7g0830 1743 CDD PHD2_CHD_II 425 466 - -
Sto7g0830 1743 SUPERFAMILY FYVE/PHD zinc finger 1342 1401 IPR011011 -
Sto7g0830 1743 SMART testlast3 199 259 IPR018501 -
Sto7g0830 1743 PANTHER PHD FINGER FAMILY PROTEIN 2 1672 - -
Sto7g0830 1743 SUPERFAMILY FYVE/PHD zinc finger 404 468 IPR011011 -
Sto7g0830 1743 MobiDBLite consensus disorder prediction 1 26 - -
Sto7g0830 1743 ProSiteProfiles Zinc finger PHD-type profile. 422 469 IPR019787 -
Sto7g0830 1743 MobiDBLite consensus disorder prediction 124 191 - -
Sto7g0830 1743 Pfam PHD-finger 425 467 IPR019787 -
Sto7g0830 1743 ProSiteProfiles DDT domain profile. 199 259 IPR018501 -
Sto7g0830 1743 Gene3D Cupin 1343 1468 - -
Sto7g0830 1743 SMART PHD_3 1347 1395 IPR001965 -
Sto7g0830 1743 SMART PHD_3 1188 1236 IPR001965 -
Sto7g0830 1743 SMART PHD_3 1631 1676 IPR001965 -
Sto7g0830 1743 SMART PHD_3 424 467 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0830 Sto-Chr7 6277851 6287005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0830 289 623 EF-hand Containing Proteins AT5G22760 42.197 7.35e-65 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Sto7g0830 DDT 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0830 - - lang:109351702 1930.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0830 7 6277851 6287005 Sto7g0830 7 6277851 6287005 ECH