Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0828 ATGGATGACCAAAATTCCACACCCACTGGGTCTCCGCCGGAGAACGGCAGCGACGCCGTGTCGGGACCTGAAGAAAGCTCCGCCGTCGCCGTTGTCGGCGCTCTTGTCGTCGCCGGAGAAAACCCCGAGGTCTTCGGGTCGGAAACAGGCGTGGTGGTGAAGAGGAAGAGGGGGAGGCCGAGGAAGTACAACGTCAATGGGGACGCCCCGCCGGCGCCGGCGCCGGAGAGAATCTCCGATGACCCCTCGTCGGGAAAGTGCGTGAAGCGAGGCAGAGGGAGGCCTCGTGGTTCGGGAAAATTGCAGCATTTGGCATCCATTGGTGGAGTTGTGGCTGATACAGCTGGAGGAGGGTTCACGCCTCATGTAGTGACTGTGAATACAGGGGAGGATGTGGTGAGTAGAATATCACTATTTTCTCTGAGGGGGCCTCGGGCTATTTGCATACTTTCTGCTACTGGTGCAGGGCGTTTTGAGATTATATCTCTAAGTGGGTCATATACAGCGGGAGGAATTAGCGGTGGGCGTCGCAAGAGTGGGATGTTGAGCGTTTCACTGGCTAAGCCTGATGGAAAAGTGTTTGGAGGTGGCGTTGAGGGTGCATTGATAGCCGCTGGTCCTATTCAACTAATAGTGGGAAGTTTCAAGCAAAACATCAGTAGGGAGATCAAAAGGAGACACTCAGTTGGATGTTCTGCTGTCGTCGTGGCTGCTAAAACGACAGAAGAAGAAGCTGACGAAACGACGACTAACGGATTATACGacgacaataataataataataatgtcgtCGTTCCTGCGACTCACAGTATGACCTCTGCTTCTTTAAATGATGGGTTGACCATTGATATTGACATCAGTGAGCCTCAATCATAA 876 0.5183 MDDQNSTPTGSPPENGSDAVSGPEESSAVAVVGALVVAGENPEVFGSETGVVVKRKRGRPRKYNVNGDAPPAPAPERISDDPSSGKCVKRGRGRPRGSGKLQHLASIGGVVADTAGGGFTPHVVTVNTGEDVVSRISLFSLRGPRAICILSATGAGRFEIISLSGSYTAGGISGGRRKSGMLSVSLAKPDGKVFGGGVEGALIAAGPIQLIVGSFKQNISREIKRRHSVGCSAVVVAAKTTEEEADETTTNGLYDDNNNNNNVVVPATHSMTSASLNDGLTIDIDISEPQS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0828 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 216 IPR005175 -
Sto7g0828 291 CDD DUF296 120 215 IPR005175 -
Sto7g0828 291 Gene3D - 155 243 - -
Sto7g0828 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 156 252 IPR039605 GO:0003680
Sto7g0828 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 155 IPR039605 GO:0003680
Sto7g0828 291 PANTHER DUF296 DOMAIN PROTEIN 156 252 - -
Sto7g0828 291 PANTHER DUF296 DOMAIN PROTEIN 30 155 - -
Sto7g0828 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 219 - -
Sto7g0828 291 SMART AT_hook_2 54 66 IPR017956 GO:0003677
Sto7g0828 291 SMART AT_hook_2 89 101 IPR017956 GO:0003677
Sto7g0828 291 MobiDBLite consensus disorder prediction 1 27 - -
Sto7g0828 291 MobiDBLite consensus disorder prediction 1 22 - -
Sto7g0828 291 MobiDBLite consensus disorder prediction 55 102 - -
Sto7g0828 291 Pfam AT hook motif 89 99 IPR017956 GO:0003677
Sto7g0828 291 Pfam AT hook motif 54 64 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0828 Sto-Chr7 6263981 6266751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0828 53 266 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 42.128 7.30e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0828 - - zju:107410591 221.09