Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0809 ATGGATGACTATAGTGGAACTGACGCCATCGCTGAAACGCAcggaactccaaaccctaactaTGGAGGACAAGAAAAGAAGCCGAAGGTGGTAGTGATTATGGGTCCCACTGGTTCTGGGAAGTCTAAGCTTGCCATTGATTTGGCCTCCCAATTCCCGATCGAAGTTATAAATGCCGATTCCATGCAGGTCTACCGTGGCCTTGATGTTCTCACCAACAAAGTACCACTCTCCGACcaaaatgGGGTGCCGCATCATCTTCTGGGTACCGTAAGTCCAAACGTGGAATTCACTGCTAAAGAGTTTCGGGATTCTGCTATTCCTCTCATCGATGTTATATTGGCTCGCAACTGCTTGCCTGTCTTAGTTGGTGGGGGATTATGGGATCTATTCAGCTTAGATTATGTCTATATTGTCAAGGCTCTTGTGAGTCCATTCCTTCTAGATGATTCAGTAGAAGATATGGATGAAACTTGTTTAAGTGACCTGCCTGGGATTACTGAGTTGGATAAGAGTTTCATCCCGGGAAAAGACACTTCAAGCAATAATTATGACCTTCTTAAAGATATCGATCCAGTTGCCGCAAATAGAATGCATCCAAATAACCATAGAAAGATAAGTCAATACCTTAGTCTGTATGCTCGCACTGGAGTTCTTCCAAGCACAATGTTCCAAGGAAAGGCGGCAGAGAATTGGGGTCAAGTTGATAACTTGAGATATGATTGCTGTTTTATTTGTGTGGATGCATCTCTTCCTGTATTGGACAGATATGTCGAACAGAGGGTAGATTGCATGATGGATGCTGGACTACTTAATGAAGTCTATGATATCTACAATCTGAATGCAGATTATACTCGAGGCTTGCGGCAGGCCATTGGTGTCCGTGAATTCGAGCCTCTTCTGAAAACCTGTGTAATTGAAGACATCtacaaaagagaaaaggaattgACTGAGGTGTCTGTAAGAGGAAAGGGTAATAAGTTATTTGATGACGATTTGAGGGAGCTCTTGAAGTTGTCTTCTGATACTAAATCCATAATGCTTTTGGAAGAAGCAGTTGAAAAAGTGAAAGTTAATACACGAAGACTAGTTCGCCGTCAGAAGAGGATGGTTAATCGACtgcaaaaattgtttgattgGACCATACACTTTGTTGATTCCACAGAATCATTGTCAAGCAAATCAGATGATATATGGAAGGAGCAAGTGGTTGAACCTGCCGTGAGCATAGTTAGGTCTTTCCTTAGTAAGAATGAAAACTTGTCACCCACATTTGGGATGTCAAATAGCAGTGGGATGAAGATAATTCAAAGGGACCTCTGGACTCAATACGTATGCAAGGCCTGTGGAGATAAGGTGCTGAGAGGATTGCATGAATGGGAACAACACAAAGAGGGTCGTTCACATCAGAAACGTATTTCTAGTCTCAAGAACAAGTCACCACGTCTTGGTTTTCCTGCCAAACACCCACCGCCACCGTTCAGGCATTCATTCAGTTCGAATATTCATTCAGTACAGAGTAGATTTTATCATCTTGTATGTGATGCGAGTTTTGGTTGGAGTTTCTATGGAGGTTGCAGCGGTGGGCGATGCGAGTTATGGTTGGAGCTGCGATGGAGGTTGGGGTTCGAATGTGTGAACGGTGGCGATGGAGATCAGGGTGTCGATCGGTGGCGGTGGGCGGTGGGAGACTGTGATGCGAGTTTTGGTTGGAGCTTCCATGGAGGTTGGGGATTGAATGTTCATAAGTAG 1752 0.4264 MDDYSGTDAIAETHGTPNPNYGGQEKKPKVVVIMGPTGSGKSKLAIDLASQFPIEVINADSMQVYRGLDVLTNKVPLSDQNGVPHHLLGTVSPNVEFTAKEFRDSAIPLIDVILARNCLPVLVGGGLWDLFSLDYVYIVKALVSPFLLDDSVEDMDETCLSDLPGITELDKSFIPGKDTSSNNYDLLKDIDPVAANRMHPNNHRKISQYLSLYARTGVLPSTMFQGKAAENWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLKTCVIEDIYKREKELTEVSVRGKGNKLFDDDLRELLKLSSDTKSIMLLEEAVEKVKVNTRRLVRRQKRMVNRLQKLFDWTIHFVDSTESLSSKSDDIWKEQVVEPAVSIVRSFLSKNENLSPTFGMSNSSGMKIIQRDLWTQYVCKACGDKVLRGLHEWEQHKEGRSHQKRISSLKNKSPRLGFPAKHPPPPFRHSFSSNIHSVQSRFYHLVCDASFGWSFYGGCSGGRCELWLELRWRLGFECVNGGDGDQGVDRWRWAVGDCDASFGWSFHGGWGLNVHK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0809 583 Pfam IPP transferase 63 369 - -
Sto7g0809 583 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 419 - -
Sto7g0809 583 MobiDBLite consensus disorder prediction 1 25 - -
Sto7g0809 583 Gene3D Classic Zinc Finger 440 482 - -
Sto7g0809 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 278 IPR027417 -
Sto7g0809 583 Hamap tRNA dimethylallyltransferase [miaA]. 30 392 IPR018022 GO:0008033
Sto7g0809 583 Gene3D - 28 439 IPR027417 -
Sto7g0809 583 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 419 IPR039657 -
Sto7g0809 583 Gene3D - 176 227 - -
Sto7g0809 583 TIGRFAM miaA: tRNA dimethylallyltransferase 30 310 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0809 Sto-Chr7 6041139 6045071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0809 18 478 C2H2 Transcription Factor Family AT2G27760 55.342 1.06e-170 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0809 K00791 - gmx:100792690 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0809 7 6041139 6045071 Sto7g0809 7 6041139 6045071 ECH