Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0804 ATGAAGGTGATCGCTGCGTATTTGCTGGCCGTCTTGGGAGGGAACACATGCCCTTCAGCTGATGATCTGAAGAACATCCTTGGCTCAGTTGGAGCTGAGGCTGATGATGACAAGATTGAGTTGCTCTTGTCTGAAGTAAAGGGCAAAGATATCACCGAGCTTATTGCAGCTGGAAGGGAAAAGTTGGCTTCAGTgcctggtggtggtggtggtgctgTGGCTGTCgcaaaggaagaaaagaaggaggAAGAGAAGGAGGAGTCTGATGATGACATGGGTTTCAGTTTATTCGACTAG 297 0.404 MKVIAAYLLAVLGGNTCPSADDLKNILGSVGAEADDDKIELLLSEVKGKDITELIAAGREKLASVPGGGGGAVAVAKEEKKEEEKEESDDDMGFSLFD 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0804 98 Pfam 60s Acidic ribosomal protein 18 97 - -
Sto7g0804 98 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 98 - -
Sto7g0804 98 Gene3D - 1 59 IPR038716 -
Sto7g0804 98 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 98 IPR044076 GO:0002182|GO:0003735|GO:0022625
Sto7g0804 98 CDD Ribosomal_P2 1 98 IPR044076 GO:0002182|GO:0003735|GO:0022625
Sto7g0804 98 MobiDBLite consensus disorder prediction 64 98 - -
Sto7g0804 98 Hamap 50S ribosomal protein L12 [rpl12]. 2 98 IPR027534 GO:0003735|GO:0005840|GO:0006414
Sto7g0804 98 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0804 Sto-Chr7 5995775 5997001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0804 1 98 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 72.449 6.47e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0804 K02943 - tcc:18590363 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0804 7 5995775 5997001 Sto7g0804 7 5995775 5997001 ECH
Sto12g0398 12 2522150 2523402 Sto7g0804 7 5995775 5997001 ECH