Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0802 ATGAGCGGCGGAAGCCGAAGATGGGACCGGAGAGATCCCCGCAGATCCAAGAAGCAGAAGCTAATCCGCAACGCCGAGGAAGAACTCGAGTCAAAATTAGGGTTCGATCTTTTCTCCGAGGGCGAAAAACGACTTGGATGGTTGCTTAATTTTTCTCCGTCATCTTGGGAGGATGAAGATACACACAAAGTCTATAGTTGTGTAGATCTTTATTTTGTTACACAGGATGGTTCTACTTTCAAGTCAAAGTACAGGTTTTGCCCTTATTTCTATGTGGCAACAAAGgatAAAATGGAGATGGATGTTGAGGCATATCTGAGACGGCGTTATGAAACTCAGATTGCGGATATTGAAATTAAAGGGAAGGAAGACCTTGATCTTAAAAACCATTTGTCTGGATtacaaaaatcttatttaaagcTGTCGTTTGATACCGTGCAACAATTGATGACTGTGAAGAGTGATCTGATGCATGTTGTTGAAAGAAATAAGGCAAAATCTGATGCTGCCGAAGCTTACGAGTCCATAATAACAGGGAGAAGGGAACAAAAACCTCAAGATTTTCTAGATTGTATAATCGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGATAAAGATATTCGGTGTGGGCAATGGTACGATGTTAGTGTGTCCAATACTGGGGTAACACTTGAGAAGAGGTCAGATCTTCTGCAGCGTGCTGAAGTTCGTGTTTGTGCTTTTGACATAGAGACCACAAAACTTCCATTGAAGTTCCCTGATGCTGACTATGATTTAATTATGATGATTTCATACATGGTAGATGGACAAGGTTATTTAATCATAAACAGAGAGTGTGTTGGGGAGGATATAGAGGATTTGGAGTACACTCCGAAACCAGAGTATGAAGGGTGTTTTAAGGTTACAAATGTTCAAAATGAGGTTGAGCTTCTTAGATTGTGGTTTTCCCATATGCAAGAGGTGAAACCTGGTATATATGTGACGTATAATGGTGATTTCTTTGATTGGCCATTTGTGGAAAGAAGGGCAGCTCATCATGGGTACAAAATGGCTGATGAGTTGGGTTTTCAATGTGACAATAATCAAGGGGAATGTCGAGCTAAATTTGCTTGCCATTTAGATTGTTTTGCGTGGGTTAAACGTGATAGTTATCTCCCTCAGGGAAGCCAAGGCTTGAAGgcTGTTACAAAAGCAAAGTTAGGTTATGATCCCCTAGAGGTGAATCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCCTCCTATTCCGTTTCTGATGCTGTGGCAACTTATTACTTGTATACAACCTATGTTcatccttttattttttctcttgcaACAATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGTAGTGGGACCCTGTGTGAAATGTTGCTTATGGTCCAGGCATACAAGGCTAATGTGATCTGCCCTAACAAGCACCAATCTGATCCAGAGAAATTTTACAACAATCACCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTATTTAGATCTGATATTCCAACTAGTTTTACACTCGAACCATCTGCCTTTGAGTTATTGATCAACAACCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGATTCTGTCTCTAACTATGATGAAGTGAAGAATGCCATCATGGAAAAGCTTATAAAATTGCGAGATGAACCAATACGTGAAGAATGCCCCCTTATTTATCATCTGGATGTAGCTGCTATGTATCCTAACATAATCTTGACAAACCGACTTCAGCCTCCTTCAATAGTTACAGATGAGGTCTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACTTGCCTTCGGAAACTTGAGTGGGTTTGGCGTGGAGAAATATTCATGGCAAAGAAAAGTGATTATTATCATTTAAAGAAGCAGATTGAGTCGGAGTTTGTTGAAGGTGCTGATAGGCAGTCTTCAAAATCATTTCTTGACCTGCCTAAGGCAGAGCAACAGTCCAAGCTAAAAGAGCGTCTAAAGAAATACTGTCAGAAGGCATATAAACGGGTACTTGACAAACCAGTAACTGAACTCCGTGAAGCAGGGATATGCATGCGGGAAAATCCATTTTATGTTGACACAGTGCGCAGTTTTCGAGATAGAAGATATGAATACAAAGGTCTGAATAAGGTTTGGAAGGGAAAGTTATCAGAAGCCAAGGCCAGTGGAAATTCTATAAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCACACAAGTGTATACTTAATTCCTTTTATGGATACGTCATGCGCAAGGACTCAAAAAGGAAGTTGACTATATCATACCCTTGTGTTATGCTTAATGTTGATGTGGCGAGGAATAATACAAATGATCAATACCAGACACTCACAGATCCGGTTAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAAGTGGATGGGCCCTACAAGGCAATGATCCTTCCAGCTTCCAAAGAAGAAGGAATTCTAATTAAGAAGCGTTATGCTGTTTTTAATGATGATGGAACCCTAGCTGAGCTGAAAGGTTTTGAGATCAAGCGCAGGGGAGAACTAAAGCTAATAAAAGTTTTCCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGGTCAACCATAGAGGAGTGCTATTCAGCTGTCGCTGCTGTGGCAAATCGCTGGCTTGATCTTCTTGATAACCAAGGAAAGGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACTACTGCTAGACGGCTTGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAGGGCCTTCGCTGTCAGTACATAGTAGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCAGTCCCTGTGGCAATATTTGAAACTGATGCCGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCTGATGTTGGCGTTCGATCCATAGTTGACTGGTCCTATTACAAGCAACGGCTGAGCTCTGCAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAagGTTGCAAATCCTGTCCCCAGGGTGATTCATCCTGATTGGTTGCATAAGAAGGTTCGGGAGAAGCAGGACAAATTTCGCCAACGAAAATTAGTTGATGTCTTCAAGTCCATGAATGCAGATGAACGCTCTAAGAAGCATAGCAATTCTAATAATGTCTGCCATGTAACGGATGAAGAGACTATTAATGACCTGGAGGACTTTGGAAATAAGACCAGGAGTAATATTAGTGGACCTAGACCAATTATACGACATTATGAAGCTAATAATGAACAGCATTCTGTAAAGTCTTGTGGGAAAGAAGATTCTGAACAACAACATAATGATCACAGCAGCGAGCGTCAGCCACTTGCACAATTACAACAAAATGGATTGTCATCTGAAAATGTTGACAGAAGTGTGGATTATCAAGGATGGCTTCAGACAAAGAAGAGAAAGTGGAAAGAAATTAtagcaagaagaaagaagcgAAGACTGAGTAATAAGATAGACCATGAAACTCAGGGAAGAAGTAATGTTGATTCGTATTTCAGAAGGCATGAGGTAGTATTGACACGGTCCCACTGGCAGATAATACAGCTAATTCAGAGTTCACAGATTGGTCAATTTTTGGCTTGGGTGGTTGTTGATGGGGTTATGCTTAAGATTCCAGTTTCTGTTCCCAGAGTCTTCTACCTCAATTCTAGATCACCTATTAATGATCAGTTTCCCGGTAAGCGTGTCAACAAGACTCTTCCACATGGAAGGCATAATTATAACCTGTATGAGGTTACAACAAATGAAGTTCAatttaaagaaacaaaaaagaagcTTGCAGATCTTCTAGGTGATCCTGATGTTGAGGGAATATATGAAACGAAGGTGCCACTGGAGTTTAAAGCTATAGTCCAGCTCGGTTGTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGAGCCTTGGAGTCTGGGTGAATTGCACATGAAGACCACTACAGAATGTGCTTATCTTGAACAATCTATATCCTTCTTTTACTTGTATCACAGCATCTCCGAGGGGCGGGCCAtatatgttggatattttcCTGCTTCTAAAACAATATCTGTTGTGGTAGTTAATCCCTATCAAAACAAAGACTTATCTCCAAATTTTCTTGAAAGACAATTCCGTGATGCTTGCCAAGCTTTGTCTCTTGAGACACCTCCCAAAAATGGTATCAATTTTAAGGTGGACTATGTTGTGAATGTCAAGGATGCTGAAACAATGATGCAGAGAGCAATAAATGATCATAGGAATGAGCATCATGGGCCTATGGTGGCTGTCATTGAATGTCCAAATCCCCAACTAATGAAATTGGCTATTCGAGCTCTAGATGACTTCCCATGCCTAAATGTCCCTTCCAATGCACGTGATAATCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAACTGGAATGCAACGCTGTGCTGCATCAGTCCAGTGGCTAAATGAGAGAATTTCTGTCTCAAAATATGCGCATGTACCATTGGGAAATTTCGAAGTTGACTGGCTTATATATACAGCAGACATCTTCTTTTCAAGAGCATTGAGTGATAATCAAcagGTACTTTGGATATCTGATGATGGCCTTCCAGATTTAGGTGGAATTAATGAAGAAGAGACATGTTTTGCTGATGAGGTCGACCAACCTGTTCTTACCTATCCTGGAGCTTATAGAAAAGTTACAGTAGAGCTAAAGATTCATCACCTGGCTGTGGATGCTCTTCTAAAGAGCAATCAGGTTAATGAATTGGAAGGAGGTGCTTTGTTAGGATTTGATAATGACATCAACTCTGGACCATTTGCCAAAAATGATCAGAATGGCTATGATGAGGCTACTTCATGTGCACATGCTTTTCGAGTACTAAAGCAGTTGATCCAGCGGTGCCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCCATATTGCAACATCTATATCGATGGCTATGCAGCCCTCAATCAAAACTTCATGATCCAGCTCTTCACCGGCTTCTCCACAAGGTCATGCGAAAGGTCTTCGCTTTGTTGTTGGCGGAGCTCCGTAAATTGGGTGCAACCATTGTTTTTGCAAACTTCTCAAGAATTATTGTAGACACAGGAAAATATGATCTCTCTGCGGCAAAAGCTTACTGTGATAGTTTGTTACGAACTCTACAATCCAGAGATTTATTTGAATGGATTGAGCTTGAACCGCTACAATTCTGGCACTCATTGCTATTCATGGATCAGGTTTGGTCAACCTGTTTTTTATTGTTGCTTAGCCTGTACTACATATATGTTGTTGTTGCCGAGGGTCTTGTTTACCAGTTGAACAAATCTACGTTTATTCCAAAACATACCAGTGTTCAACATAGCCTCAAGGTCTTGTTGAAAAATTTTATAGCATTACTGAATTACAGAAAAATTCTTTTGACCGATCTTTTAACAggattcttttttttcttgattgaaGAAGTTTGCTTTCAAATGGTTAATGGTGATCAAATGATGAATGCATCTACATACTTTATAACTATGGTAAAATACTTAATATTGCTGGAATGTAGAACTGCAATACGGGCTTCATTGCTAAATGTATTATTACTTGATTCCACATTTCTTGGTTCTTATTTTAGTGTGCAGCATGATGTTCTGCACTTATGCTTTGTTATCATATTTGATGAATTTGTTGAGGATtcTTCATTTGaatccTCGACATATAATTTAGGCttaaaCAGTAATGTTATAATCATGATTGTTTGTGTCCTTTGCTTGATAGGTGATGAGAAAGAATTTGTTGAGATATGTAACAAAGTTATAAATTATGATTGTTCACTGGTTATTAAGCACTTAATAGATAATGTACAAAAAGCAAGGTTGAAACCAGTAAAGCGACATGTATCCCAGTTCTATAAGAACTAG 6132 0.3909 MSGGSRRWDRRDPRRSKKQKLIRNAEEELESKLGFDLFSEGEKRLGWLLNFSPSSWEDEDTHKVYSCVDLYFVTQDGSTFKSKYRFCPYFYVATKDKMEMDVEAYLRRRYETQIADIEIKGKEDLDLKNHLSGLQKSYLKLSFDTVQQLMTVKSDLMHVVERNKAKSDAAEAYESIITGRREQKPQDFLDCIIDLREYDVPYHVRFAIDKDIRCGQWYDVSVSNTGVTLEKRSDLLQRAEVRVCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPEYEGCFKVTNVQNEVELLRLWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHHGYKMADELGFQCDNNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPTSFTLEPSAFELLINNLDRDLQYAIRVEGKMDLDSVSNYDEVKNAIMEKLIKLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFVEGADRQSSKSFLDLPKAEQQSKLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLTDPVRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSDVGVRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVIHPDWLHKKVREKQDKFRQRKLVDVFKSMNADERSKKHSNSNNVCHVTDEETINDLEDFGNKTRSNISGPRPIIRHYEANNEQHSVKSCGKEDSEQQHNDHSSERQPLAQLQQNGLSSENVDRSVDYQGWLQTKKRKWKEIIARRKKRRLSNKIDHETQGRSNVDSYFRRHEVVLTRSHWQIIQLIQSSQIGQFLAWVVVDGVMLKIPVSVPRVFYLNSRSPINDQFPGKRVNKTLPHGRHNYNLYEVTTNEVQFKETKKKLADLLGDPDVEGIYETKVPLEFKAIVQLGCVCKVDKTAKKRSLQEPWSLGELHMKTTTECAYLEQSISFFYLYHSISEGRAIYVGYFPASKTISVVVVNPYQNKDLSPNFLERQFRDACQALSLETPPKNGINFKVDYVVNVKDAETMMQRAINDHRNEHHGPMVAVIECPNPQLMKLAIRALDDFPCLNVPSNARDNQYQILGWQQVAAKTGMQRCAASVQWLNERISVSKYAHVPLGNFEVDWLIYTADIFFSRALSDNQQVLWISDDGLPDLGGINEEETCFADEVDQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNELEGGALLGFDNDINSGPFAKNDQNGYDEATSCAHAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHRLLHKVMRKVFALLLAELRKLGATIVFANFSRIIVDTGKYDLSAAKAYCDSLLRTLQSRDLFEWIELEPLQFWHSLLFMDQVWSTCFLLLLSLYYIYVVVAEGLVYQLNKSTFIPKHTSVQHSLKVLLKNFIALLNYRKILLTDLLTGFFFFLIEEVCFQMVNGDQMMNASTYFITMVKYLILLECRTAIRASLLNVLLLDSTFLGSYFSVQHDVLHLCFVIIFDEFVEDSSFESSTYNLGLNSNVIIMIVCVLCLIGDEKEFVEICNKVINYDCSLVIKHLIDNVQKARLKPVKRHVSQFYKN 2043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0802 2043 Gene3D DNA Polymerase, chain B, domain 1 56 232 - -
Sto7g0802 2043 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Sto7g0802 2043 SMART DUF1744_2 1442 1821 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Sto7g0802 2043 MobiDBLite consensus disorder prediction 1149 1177 - -
Sto7g0802 2043 Gene3D - 238 468 IPR036397 GO:0003676
Sto7g0802 2043 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 797 1874 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Sto7g0802 2043 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 796 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Sto7g0802 2043 CDD POLBc_epsilon 503 1063 - -
Sto7g0802 2043 MobiDBLite consensus disorder prediction 1149 1173 - -
Sto7g0802 2043 SMART polmehr3 239 882 IPR006172 GO:0000166|GO:0003676|GO:0003887
Sto7g0802 2043 CDD DNA_polB_epsilon_exo 240 443 - -
Sto7g0802 2043 Gene3D - 862 987 IPR042087 -
Sto7g0802 2043 MobiDBLite consensus disorder prediction 1 21 - -
Sto7g0802 2043 Pfam Domain of unknown function (DUF1744) 1458 1820 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Sto7g0802 2043 SUPERFAMILY Ribonuclease H-like 58 467 IPR012337 -
Sto7g0802 2043 SUPERFAMILY DNA/RNA polymerases 469 1082 IPR043502 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0802 1 797 Core DNA Replication Machinery Family AT1G08260 84.586 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0802 K02324 - pvy:116129006 2914.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0802 7 5966341 5987643 Sto7g0802 7 5966341 5987643 ECH