Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0791 ATGTATAGCAACTTTAAGGAGCAGGCGATAGAGTACGTGAAACAAGCCGTGCAGGAAGACAATGCTGGGAATTACGCGAAAGCGTTTCCTCTGTATATGAATGCTTTGGAATACTTCAAGACCCATTTGAAGTACGAGAAGAATCCTAAGATTAAAGAAGCGATTACCCAGAAATTCACCGAGTATCTTCGGCGGGCGGAGGAGATCCGAGCTGTTCTTGATGACGGAGGGCCTGGCCCGGCGTCCAATGGGGATGCTGCAGTAGCTACGCGGCCCAAGACGAAGCCTAAAGATGGGGAAGGAGATGGGGAGGATCCGGAGCAGTCAAAGCTCAGGGCTGGGCTGAATTCAGCGATCATTCGGGAAAAACCCAATGTGAAATGGAACGACGTTGCTGGGTTGGAGAGTGCGAAGCAAGCCTTGCAGGAGGCCGTTATATTACCCGTGAAGTTCCCGCAATTCTTCACAGGTAAAAGACGACCCTGGAGAGCATTTTTGTTGTATGGGCCACCTGGTACAGGGAAATCATATTTGGCCAAGGCTGTCGCAACTGAAGCTGACTCCACATTTTTCAGTGTTTCTTCGTCAGATCTGGTCTCTAAGTGGATGGGTGAAAGTGAAAAATTAGTTTCAAACCTTTTCCAAATGGCTCGAGAAAGTGCTCCTTCCATCATATTTGTTGATGAAATAGATTCTCTATGTGGTCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATCAAAACTGAACTTTTAGTTCAGATGCAGGGTGTAGGAAACAATGATCAGAAAGTTCTTGTTCTTGCAGCAACTAATACACCCTATGCTCTCGATCagGCAATAAGGCGGCGATTTGATAAGCGAATATACATTCCTCTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGCAAGTGCAATATACTTGGTGCATTTGGGAGATACTCCTCATAACTTGAGTGAAAGTGATTTTGAGCACTTGGCTCGTAGGACAGATGGATTTTCTGGTTCAGATATATCTGTTTGTGTCAAGGATGTTTTATTTGAACCTGTTCGTAAAACCCAAGATGCCATGtatttcttcaagaattctgAGGGAATGTGGATCCCTTGCGGACCAAAGCAACAGAATGCCATACAAATCACAATGCAGGATCTTGCTGCAAAAGGACTTGCTTCTAAGATCCTTCCACCTCCTATTACGAGAACAGATTTTGACAAGGTGCTGGCTAGACAAAGGCCTACAGTAAGCAAAGCTGACCTTGAGGTTCATGAGAGATTTACTAAGGAGTTTGGAGAGGAAGGTTGA 1317 0.4495 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKTKPKDGEGDGEDPEQSKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKASAIYLVHLGDTPHNLSESDFEHLARRTDGFSGSDISVCVKDVLFEPVRKTQDAMYFFKNSEGMWIPCGPKQQNAIQITMQDLAAKGLASKILPPPITRTDFDKVLARQRPTVSKADLEVHERFTKEFGEEG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0791 438 MobiDBLite consensus disorder prediction 91 109 - -
Sto7g0791 438 Gene3D - 6 75 - -
Sto7g0791 438 Pfam ATPase family associated with various cellular activities (AAA) 166 295 IPR003959 GO:0005524|GO:0016887
Sto7g0791 438 MobiDBLite consensus disorder prediction 73 110 - -
Sto7g0791 438 SUPERFAMILY MIT domain 2 81 IPR036181 -
Sto7g0791 438 SMART smart 2 79 IPR007330 -
Sto7g0791 438 PANTHER AAA DOMAIN-CONTAINING 1 438 - -
Sto7g0791 438 Pfam Vps4 C terminal oligomerisation domain 371 435 IPR015415 -
Sto7g0791 438 Pfam MIT (microtubule interacting and transport) domain 7 70 IPR007330 -
Sto7g0791 438 ProSitePatterns AAA-protein family signature. 267 286 IPR003960 GO:0005524|GO:0016887
Sto7g0791 438 CDD AAA 132 295 - -
Sto7g0791 438 SMART AAA_5 161 297 IPR003593 -
Sto7g0791 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 434 IPR027417 -
Sto7g0791 438 Gene3D - 297 418 - -
Sto7g0791 438 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 438 - -
Sto7g0791 438 CDD MIT_VPS4 4 77 IPR045253 -
Sto7g0791 438 Gene3D - 124 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0791 Sto-Chr7 5846513 5852713 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0791 160 359 Calmodulin-binding Proteins AT3G56690 37.129 1.02e-33 132