Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0778 ATGCAGAGCAGAGATCCCTCCATGAAAGAACCAATAAGAAAACACAGGCGAAATCAAGGAGGGCCTGCTTTTGATTTTGGAGGGTTGGAAGAGGCAATTGCTCTGCAAGGAGTGAAGATtagaaatgatgatgatgaagccaaaacatGCAAACCTGCTTCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCACCACACCCCAACACCTGGAGGTTCAAAGTCCGGAGGGGAGAGCACAGATTCAGGATCAGGTTTGAATACAATTTCAATTTGTAGCAGAAATGAGGCACACCAATATGAACCAGAATCTCCCATGAGTGATGACAAGAAGGTGTTTGGTTGTGATtatcataataataatcatcATGAGGGTTTTGATGACCAAacaatggtggtggtgggggtGGGGAGTGATGATGCTTCAAGATGCCAAACACAGAATCAGAATAAGAATCAATTAGCTGCCAAATCAGCATCATCTTCTCAAGAAAAGaGGAAGGGGGTTGGTTCTACATCAGAGAAACCACTTGATGctaagACATTGAGGCGTTTGGCTCAGAACAGAGAAGCTGCAAGGAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTTCCCAGCTTGAACAAGAGCTTCATAGAGCTCGCTCTCAGGGATTGTTGATGAATAGTGGTGGTGGTGCTGGTAGCAACATAACTTCTGGAGGTGCAGTATTTGACATAGAGTATGGAAGATGGTTGGAGGATGAGCAGCGGCACATGGCGGAGGTGCGGCGGAGCTTGCAGGCGGcggtgacggacggcgaactGAGAGGGGCGGTGGAGGGATACGTGGCACACTACGATGAGCTGTTTGAATTGAAAGGAATTGCTGCCAAATCTGATATGGTGATACAACAATTAGAGCCACTAGCAGAGCAGCAAGTAATGGGAATGTATGCACTTAGGCATTCCTCACAGCAAGCAGAGGAGGCTCTCTCTCAAGGCCTTGACCAACTTCAGCAATCTCTCGTCGACACCATTGCCGGCGGCCTCGTCGTCGACGGCGTCCAACAAATGCTCGTTGCCATGGGCAAGCTTTCCAATCTCGAAGGCTTTATCCGCCAGGCTGATAACTTGAGACAACAAACACTTCACCAATTGTGTCGATTGCTAACAGTTCGTCAAGCAGCACGATGTTTGGTTGTGATTGGAGAGTACTATGCTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCATCACGACCACCACATCAGACATTGATGAACGATGAGAATTCATGCCAAACAGGAACGAATCTCCCCATAGTTCAGTCATCTCAGGATCATTTCTCTAGTTTctga 1374 0.4403 MQSRDPSMKEPIRKHRRNQGGPAFDFGGLEEAIALQGVKIRNDDDEAKTCKPASATLEMFPSWPMRFHHTPTPGGSKSGGESTDSGSGLNTISICSRNEAHQYEPESPMSDDKKVFGCDYHNNNHHEGFDDQTMVVVGVGSDDASRCQTQNQNKNQLAAKSASSSQEKRKGVGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQELHRARSQGLLMNSGGGAGSNITSGGAVFDIEYGRWLEDEQRHMAEVRRSLQAAVTDGELRGAVEGYVAHYDELFELKGIAAKSDMVIQQLEPLAEQQVMGMYALRHSSQQAEEALSQGLDQLQQSLVDTIAGGLVVDGVQQMLVAMGKLSNLEGFIRQADNLRQQTLHQLCRLLTVRQAARCLVVIGEYYARLRALSSLWASRPPHQTLMNDENSCQTGTNLPIVQSSQDHFSSF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0778 457 SMART brlzneu 179 245 IPR004827 GO:0003700|GO:0006355
Sto7g0778 457 MobiDBLite consensus disorder prediction 1 20 - -
Sto7g0778 457 MobiDBLite consensus disorder prediction 144 170 - -
Sto7g0778 457 MobiDBLite consensus disorder prediction 75 91 - -
Sto7g0778 457 MobiDBLite consensus disorder prediction 144 185 - -
Sto7g0778 457 Pfam bZIP transcription factor 182 222 IPR004827 GO:0003700|GO:0006355
Sto7g0778 457 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Sto7g0778 457 Coils Coil 202 229 - -
Sto7g0778 457 SUPERFAMILY Leucine zipper domain 183 225 IPR046347 GO:0003700|GO:0006355
Sto7g0778 457 MobiDBLite consensus disorder prediction 171 185 - -
Sto7g0778 457 Gene3D - 182 233 - -
Sto7g0778 457 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Sto7g0778 457 MobiDBLite consensus disorder prediction 64 91 - -
Sto7g0778 457 MobiDBLite consensus disorder prediction 1 26 - -
Sto7g0778 457 ProSiteProfiles DOG1 domain profile. 198 425 IPR025422 GO:0006351|GO:0043565
Sto7g0778 457 PANTHER TRANSCRIPTION FACTOR TGA9 307 432 - -
Sto7g0778 457 PANTHER TRANSCRIPTION FACTOR TGA9 46 307 - -
Sto7g0778 457 Pfam Seed dormancy control 264 308 IPR025422 GO:0006351|GO:0043565
Sto7g0778 457 PANTHER TRANSCRIPTION FACTOR TGA9 307 432 - -
Sto7g0778 457 PANTHER TRANSCRIPTION FACTOR TGA9 46 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0778 Sto-Chr7 5722601 5731994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0778 165 457 bZIP Transcription Factor Family AT1G08320 65.325 3.72e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto7g0778 DOG1 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0778 K14431 - pop:7460056 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0778 7 5722601 5731994 Sto12g0415 12 2645097 2661312 CCT
Sto7g0778 7 5722601 5731994 Sto7g0778 7 5722601 5731994 ECH