Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0772 ATGTACCAAAATCATCAGAATCACGCAAAGAACATCCATTCTTCTTCAAGGCATATGTTCCTTCAAACTGGAAATGGGTCTAGTGATTCTGGACTTGTACTCTCAACAGATGCTAAGCCTAGATTGAAATGGACGCCAGATCTTCATGCAAGGTTTATAGAAGCAGTCAATCAGCTAGGTGGAGCAGACAAGGCAACTCCAAAAACAGTGATGAAACTCATGGGGATTCCAGGGCTCACTTTATATCATCTAAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCATGGTCAAAGTAACAATGTAACACACAAAATCAGTGCAGTAAACGGGGAAAGACTTTCTGAAGCAACTGGAACTCATAGTCATATGAACAATATAAGCCTTGGGCCACAGGCTAACAAAGATTTACATATAAGCGAGGCATTGCAGATGCAGATTGAAGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTGCAACTTCGCATAGAGGCCCAAGGAAAATACCTGCAGTCTGTGCTTGAAAAAGCACAGGAAACACTAGGTAGACAGAATTTGGGAATAGTAGGAATTGAAGCTGCTAAAGTTCAACTCTCAGAGCTGGTGTCCAAAGTATCCTCTCAATGCCTGAATTCTGCTTTCTCAGAGCTGAAGGAATTACATGGATTTTGCCCTCAGAACAACACACAAACCAACCAACAACCAAATGATTGCTCAATGGACAGCTCCCTCACATCCTGCGAGGGATCTCAAAGGGAGCAAGACCACATGCAAAATGGATCAGGGATGTGCTTAATAAGACCCTTCAATGTTAGCCTTGGCCACCACACCTTCATGGAACGAAAGGAATCCAATACTGAAGTGAAAAAGAACAATTTCCTCAACCCTTTGGGAAAGAACATTATTGCAGAAAGAAGCTATGATGCCGTAGAAAGAAGTACTCCCAGCAACAACTTAACTATGAGCATTGGACTTGAAGGAGAAACAAAGAATGATAGAACAGAAGCAATGAAATTAGCAGTGGatgaaaaattttctcgagACTATAATAGATTGCCATACTATGCAACAACACCAAGACTAGACCTTAACACACATCAAGAAAACGATAATGGTGCAACGAGTTGTAAACAGCTGGACTTGAACGGATTTAGTTGGAACTGA 1182 0.4103 MYQNHQNHAKNIHSSSRHMFLQTGNGSSDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAVNGERLSEATGTHSHMNNISLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGIEAAKVQLSELVSKVSSQCLNSAFSELKELHGFCPQNNTQTNQQPNDCSMDSSLTSCEGSQREQDHMQNGSGMCLIRPFNVSLGHHTFMERKESNTEVKKNNFLNPLGKNIIAERSYDAVERSTPSNNLTMSIGLEGETKNDRTEAMKLAVDEKFSRDYNRLPYYATTPRLDLNTHQENDNGATSCKQLDLNGFSWN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0772 393 MobiDBLite consensus disorder prediction 369 393 - -
Sto7g0772 393 MobiDBLite consensus disorder prediction 238 263 - -
Sto7g0772 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Sto7g0772 393 Coils Coil 142 162 - -
Sto7g0772 393 Pfam MYB-CC type transfactor, LHEQLE motif 140 186 IPR025756 -
Sto7g0772 393 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 393 IPR044848 GO:0003700
Sto7g0772 393 PANTHER MYB-RELATED PROTEIN 2 6 393 - -
Sto7g0772 393 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Sto7g0772 393 Gene3D - 38 96 - -
Sto7g0772 393 Pfam Myb-like DNA-binding domain 41 92 IPR001005 -
Sto7g0772 393 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0772 Sto-Chr7 5701804 5703670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0772 71 393 G2-like Transcription Factor Family AT3G04030 50.867 4.38e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto7g0772 Myb_DNA-binding 3.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0772 - - gmx:100810396 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0772 7 5701804 5703670 Sto12g0416 12 2662232 2664559 CCT