Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0755 ATGGAGAGTAGTAGTGTTGATAATAATGTTCCACCTGGCTTTCGGTTCTACCCAACAGAAGAAGAGCTGATTACTTTCTACTTACACAACATGCTTGAAGGTCAAGCAACCCACCATCTTAACAAAGTCATCCCACTCATTCACCTCTATGATGTTGAGCCATGGCATCTTCCAAAATTAGCAGGAGAGAAGTGTggtggagagagagagcaatGGTTCTTCTTCTCGGAGAGACAAGAGAGAGAAGCGAGAGGAGGGAGACCCAACCGAACCACTCCTTGTGGGTATTGGAAAGCCACCGGATCTCCCGGTTACGTTTACTCTTCTCATAACACAGTGATAGGAGTGAAGAGAAGCATGGTTTTTTACAGAGGGAAAGCCCCTTGTGGCACCAAAACCAAGTGGAAGATGAACGAATACAGAGCCATTCAATTATCCCACCACCAAGATGAGTCCAAGTCCAATAATGCTAAAGGGAAAGCCATTGTTGTAGTTTCAACAAAAGCTAGCCCTCTTCCGACACCACCTGGTAGATGGAAGAAAGGGCTTGCCATCACCGATTTCATCCTCAGACTCGGTGCCATCGGAGCCACCATGGGCGCCGCCGCCCTTATGGGAACCAATGAACAAATGCTTCCATTCTTCACTCAGTTTCTTGAATTCCATGCTCAGTGGAACGAATTTCCCATGTTTCAgttttttGTGATAGCAAATGGAGTAGCATCCGGGTACCTTGTACTGTCCTTGCCATTCTCACTTGTGTGCATTGTTCGGCCACTCGCTGTAGCACCAAGGCTTCTACTTGTGATCATGGACACAataatgaTGGCGTTGGTGACAGCGGGTGCTTCGTCTGCGGCAGCAACATCATACTTAGCTCACAATGGAAGCGAAGACGCCAATTGGATGGCTGTATGCTCTCAGTACACTGACTTCTGTCAGGTTGGAAGCGAAGCTGTGGTCGTTTCCTTCGTTGCTTCCATTTTCTTCCTTTGCTTGATCCTCGTTTCAGCTCTCGCTCTCAGAAGggcttaa 1035 0.4599 MESSSVDNNVPPGFRFYPTEEELITFYLHNMLEGQATHHLNKVIPLIHLYDVEPWHLPKLAGEKCGGEREQWFFFSERQEREARGGRPNRTTPCGYWKATGSPGYVYSSHNTVIGVKRSMVFYRGKAPCGTKTKWKMNEYRAIQLSHHQDESKSNNAKGKAIVVVSTKASPLPTPPGRWKKGLAITDFILRLGAIGATMGAAALMGTNEQMLPFFTQFLEFHAQWNEFPMFQFFVIANGVASGYLVLSLPFSLVCIVRPLAVAPRLLLVIMDTIMMALVTAGASSAAATSYLAHNGSEDANWMAVCSQYTDFCQVGSEAVVVSFVASIFFLCLILVSALALRRA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0755 344 ProSiteProfiles NAC domain profile. 10 168 IPR003441 GO:0003677|GO:0006355
Sto7g0755 344 PANTHER CASPARIAN STRIP MEMBRANE PROTEIN 4 148 343 - -
Sto7g0755 344 Gene3D NAC domain 19 171 IPR036093 GO:0003677|GO:0006355
Sto7g0755 344 Pfam No apical meristem (NAM) protein 11 141 IPR003441 GO:0003677|GO:0006355
Sto7g0755 344 Pfam Casparian strip membrane protein domain 181 329 IPR006702 -
Sto7g0755 344 SUPERFAMILY NAC domain 7 148 IPR036093 GO:0003677|GO:0006355
Sto7g0755 344 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 188 340 IPR006459 -
Sto7g0755 344 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 148 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0755 Sto-Chr7 5625296 5630460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0755 8 144 NAC Transcription Factor Family AT5G22380 63.504 7.77e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0755 DUF588 3e-41 CL0396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0755 - - ccaj:109817352 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0755 7 5625296 5630460 Sto12g0430 12 2746651 2747577 CCT
Sto7g0755 7 5625296 5630460 Sto7g0755 7 5625296 5630460 ECH