Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0748 ATGTCAATCGCTGCTTCCTCCATGTTTCCCGGCTTCAGGTTCTGCCCTACCGACGAGGAATTGATTTCCTATTACCTCCGCAAGAAGCTGGACGGCCATGAAGAGAGTGTTCAGGTCATTTCCGAGGTCGAACTTTGCAGATTTGAGCCTTGGGATTTACCagCGAAATCGTTCATTCAGTCGGATAACGAGTGGTTCTTCTTCTCTCCTCGAGGAAGAAAGTACCCTAATGGGTCGCAGAGTAAGAGGGCAACTGAATGTGGTTACTGGAAGGCCACTGGGAAAGAGCGCAACGTCAAGTCTGGTTCTAATGTTATAGGCACCAAACGGACTTTGGTTTTCCACTTGGGTCGTGCACCTAAAGGGGAAAGAACTGAATGGATTATGCATGAATACTGCATCAATGACAAATCTCAGGATTCATTGGTTGTTTGTCGCCTAAAGAGGAACACAGAGTTCCGATTGAACGATGCGTCAAATAGAGCGTCTTCAAGTCAAGTAGTGGCAGTGAATTCGCATGAAAGTAACTGTGCTGTTTCAGAAGCTGAGATTGACCAAAGGGCTCTTTCTGAACAAGATAAAGGGGTTGCAGGATGCAGTTCCAAGCGCAGCAGTTGCAGTTATGGTTCTCCTTCAGTGGAGCAAATTGATTCTGCCTCTGAATCCAATCAGCGACCAGCCAATGACGCTGCTTTGACCGAAACTTCGAGTCACCAAAAGGAGGCGGATGAAGAGGATTGTTATGCAGAGATATTGAAGGATGATATAATCAAATTAGATGAATCGTCACTGACATCGCAAGAGGCACACACTAGAATGCAGGATCCTTCCCATCAGATGCTTCCTTTCCAAGGCACAGCACAACGAAGGATTAGATTAAGGATGgagaaacccaagaagaagcTTGGTTCTTCTTCTACTACTGGAGGAGTTGGTTTTGCTGGCTCAAAGCACTCATCCAAATGTACCCTGTTTGTCTCAAACAAGTGA 990 0.4505 MSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCRFEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKRNTEFRLNDASNRASSSQVVAVNSHESNCAVSEAEIDQRALSEQDKGVAGCSSKRSSCSYGSPSVEQIDSASESNQRPANDAALTETSSHQKEADEEDCYAEILKDDIIKLDESSLTSQEAHTRMQDPSHQMLPFQGTAQRRIRLRMEKPKKKLGSSSTTGGVGFAGSKHSSKCTLFVSNK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0748 329 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Sto7g0748 329 MobiDBLite consensus disorder prediction 197 235 - -
Sto7g0748 329 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Sto7g0748 329 ProSiteProfiles NAC domain profile. 8 150 IPR003441 GO:0003677|GO:0006355
Sto7g0748 329 SUPERFAMILY NAC domain 4 149 IPR036093 GO:0003677|GO:0006355
Sto7g0748 329 MobiDBLite consensus disorder prediction 295 318 - -
Sto7g0748 329 MobiDBLite consensus disorder prediction 190 244 - -
Sto7g0748 329 MobiDBLite consensus disorder prediction 302 318 - -
Sto7g0748 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 4 301 - -
Sto7g0748 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0748 Sto-Chr7 5577550 5579655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0748 1 279 NAC Transcription Factor Family AT2G27300 53.214 1.22e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0748 NAM 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0748 - - gsj:114373381 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0748 7 5577550 5579655 Sto7g0748 7 5577550 5579655 ECH