Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0722 ATGCTCCTTCAAAATCCCAATCCTAACGACTCTCCCCCTCTCCTCGACGCGCTCAACCCCCACGCGccatcttcctcctcctcctcctccgctTTTCTCCCTCTCGGATCCCACGATTTCTCCGGCTTCCACGCCTTCGCCGCCGCCCCGCCTCCTCCTCCGCGTACTCTCCACTACAATCTCTGGCCCTCCTCGACTTCTTCCATCAATATCGATCATCATCAACCGGCAACCGCCTCCACCAGTTCCGCCGGCGGCGGCGCCGGGGATATGTCGCCGCACATGAGCTTCCGGAGGCCTAGTCAGCAGGGGTTGTCGCTGAGCCTGTCGTCCCAACAACAAACAGCTTATAGGCCGTCGCCATCGTCGCTCTCCGGCGAGCTCGACGCGGCGGCTATGTCCGGCGGTGGGGACGTGGTGAGTTTCGTTTTGGGGTCCAAGTATTTGAAAGCGGCACAGGAGGTCTTGGATGAAGTTGTGAATGTGGGGAAGGGAATAATCCAGAAGAGCGAGTACTCCATAGAAGGGGGGAAGATCGGTACGAAAGCCAATAGGGAGTCGACATCTGGAGGGAATCGTGACGGTTCAAGTAGCGTCGGCGGAGGAGAAAATAgtggtaataataataataataatgggaaGCAAGAAGCTGAAGTAGCTCCTCTCACTACAGCACAACGACAAGAGCTTCAGATGAAGAAGTCCAAACTCATTAGCATGCTCGACGAGGTGGAGCAAAGGTACAGACAGTATGAGCAGGAAATGCGAATAGTGATATCATCATTCGAGCAGGCAGCGGGATATGGGGGTGCGAAGACATATACGTCGCTAGCCCTAAAGACGATTTCGAAGCAGTTTCGGTGTCTGAAAGACGCAATCGCGTCGCAAGTGAGAGCGACGAGCAAGAGTTTAGGGGAGGAGGAGTGTTGGTTGGGGGCTAAGGTGGAAGGCTCGAGGCTCAAGTATGTGGACCATCATCTACGCCAACACCGAGCCTTGCAGCAAATAGGAATGATGCAACCCAATGCTTGGAGACCCCAACGAGGCTTGCCTGAACGAGCCGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTACCCCAAGGACTCCGATAAAGTTATGCTTGCAAAACAAACAGGACTTACTCGAAGTCAGGTGTCAAACTGGTTCATAAATGCAAGAGTTAGGCTGTGGAAACCAATGGTGGAAGAAATGTACATGGAAGAAATGAAGGATGACCAAGATGGGTCCCATCGGGAAAATAGTAGTGCAGGGAAGGAGGTGGCGGGACCAAgcactaataataatattaaagaacCATCACAATTACCACAAGATCATCCATCAGGTGGTTCAGgtggaggtgcaggattcATCCACAAcattcaccatcatcatcatcatgacaTGCAAATCACAAGTCCCAAAAAGGCAAGAACAAGTAGTACAACTTCggaaatgatgatgatgcacAACACTCCAAGTAGCATCCTGTCGTCCGATGCAAATATGAATCATCATGGGTTCTCCATGGAAGACATTGGAAGGTTTAACAACGTTGTGGTTGATCATCACCAATTGCCTCCAACAAGGTTTCATCACCAGCATGCAAATAACAATGCTGTGTCTCTCACTCTAGGACTCCCCCATACTCCAGACAACAACATTTCTTCACTCTCCCATGGATTTCTGTCGTCCCACAATATCAATTTAGGAAGTGATCATCATGATGCGACCTCCGAGTTTTGTGGAATCAACACTTCTCATTCTTCAACCACAAGTAATTATGAGAGTAATAATATTGACATCCAGAACAGGAAGAGGTTTGCTGCACAGTTGTTGCCAGATTTCGTGTcctga 1872 0.4679 MLLQNPNPNDSPPLLDALNPHAPSSSSSSSAFLPLGSHDFSGFHAFAAAPPPPPRTLHYNLWPSSTSSINIDHHQPATASTSSAGGGAGDMSPHMSFRRPSQQGLSLSLSSQQQTAYRPSPSSLSGELDAAAMSGGGDVVSFVLGSKYLKAAQEVLDEVVNVGKGIIQKSEYSIEGGKIGTKANRESTSGGNRDGSSSVGGGENSGNNNNNNGKQEAEVAPLTTAQRQELQMKKSKLISMLDEVEQRYRQYEQEMRIVISSFEQAAGYGGAKTYTSLALKTISKQFRCLKDAIASQVRATSKSLGEEECWLGAKVEGSRLKYVDHHLRQHRALQQIGMMQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKDDQDGSHRENSSAGKEVAGPSTNNNIKEPSQLPQDHPSGGSGGGAGFIHNIHHHHHHDMQITSPKKARTSSTTSEMMMMHNTPSSILSSDANMNHHGFSMEDIGRFNNVVVDHHQLPPTRFHHQHANNNAVSLTLGLPHTPDNNISSLSHGFLSSHNINLGSDHHDATSEFCGINTSHSSTTSNYESNNIDIQNRKRFAAQLLPDFVS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0722 623 Pfam Associated with HOX 143 294 IPR006563 -
Sto7g0722 623 ProSiteProfiles 'Homeobox' domain profile. 341 404 IPR001356 GO:0003677
Sto7g0722 623 MobiDBLite consensus disorder prediction 1 30 - -
Sto7g0722 623 CDD homeodomain 344 404 IPR001356 GO:0003677
Sto7g0722 623 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 19 579 - -
Sto7g0722 623 MobiDBLite consensus disorder prediction 70 87 - -
Sto7g0722 623 MobiDBLite consensus disorder prediction 96 122 - -
Sto7g0722 623 MobiDBLite consensus disorder prediction 178 215 - -
Sto7g0722 623 MobiDBLite consensus disorder prediction 70 129 - -
Sto7g0722 623 Pfam Homeobox KN domain 361 400 IPR008422 GO:0003677|GO:0006355
Sto7g0722 623 Gene3D - 347 425 - -
Sto7g0722 623 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 19 579 - -
Sto7g0722 623 MobiDBLite consensus disorder prediction 182 215 - -
Sto7g0722 623 SUPERFAMILY Homeodomain-like 345 412 IPR009057 -
Sto7g0722 623 SMART HOX_1 344 408 IPR001356 GO:0003677
Sto7g0722 623 MobiDBLite consensus disorder prediction 414 488 - -
Sto7g0722 623 SMART prehox3 137 295 IPR006563 -
Sto7g0722 623 MobiDBLite consensus disorder prediction 430 452 - -
Sto7g0722 623 Coils Coil 227 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0722 Sto-Chr7 5334718 5338418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0722 18 623 Homeobox Transcription Factor Family AT2G35940 41.926 5.99e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Sto7g0722 POX 6.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0722 - - gmx:100779075 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0722 7 5334718 5338418 Sto12g0461 12 2971407 2971751 CCT
Sto7g0722 7 5334718 5338418 Sto7g0722 7 5334718 5338418 ECH