Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0718 ATGAAAATCCATAAAATAGTAAGTGTTCAAGATAAAGTGAGATATATCGATTATTTATTCCTGGGAGATTATGTTGACCGGGGCCAACACAGCCTGGAAACTATAACCCTTCTACTTACTTTGAAGATTGAATATCCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGTATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGGATTAATCGTTTATTTAATTGGCTTCCTTTGGCGGCTctaattgagaaaaaaattatttgcatgCATGGTGGTATTGGTCGTTCAATAAATCATGTGGAACAGATTGAAAATCTTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTTATGGATCTGTTGTGGTCCGATCCTACGGAGAATGACAGTGTGGAAGGACTACGGCCAAATGCTAGAGGTCCAGGTTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTCTGCAACAATAATGATCTTCAGCTGATTGTTCGTGCGCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCACAGGGACATTTGATCACGCTTTTCTCAGCTACAAATTACTGCGGTACTGCAAATAATGCTGGCGCAATTTTAGTTCTGGGTAGAGATCttgttgttgttcctaaactaatTCATCCATTACCACCTGCAATTTCTTCGCCAGAAACATCGCCAGAACGTCATATTGAAGATACGTGGATGCAGGAGTTGAATGCTAATAGACCACCGACTCCAACTAGAGGCCGTCCTCCAGTAGCAAATGATCGAGAAAGCTTGAAGGCTTTCTTAATTTTGGTTTTCACAAGTCAATCAGCAGGCAGATACAAGTTCGAGATGCAGGTTGGTAGCCACTGCTGGTTTACTTTGAAAAGCTGCGAGTAG 954 0.4025 MKIHKIVSVQDKVRYIDYLFLGDYVDRGQHSLETITLLLTLKIEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVANDRESLKAFLILVFTSQSAGRYKFEMQVGSHCWFTLKSCE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0718 317 SUPERFAMILY Metallo-dependent phosphatases 17 246 IPR029052 -
Sto7g0718 317 SMART pp2a_7 1 239 IPR006186 GO:0016787
Sto7g0718 317 Pfam Calcineurin-like phosphoesterase 18 190 IPR004843 GO:0016787
Sto7g0718 317 ProSitePatterns Serine/threonine specific protein phosphatases signature. 52 57 IPR006186 GO:0016787
Sto7g0718 317 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 12 283 - -
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 18 45 IPR006186 GO:0016787
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 51 75 IPR006186 GO:0016787
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 89 115 IPR006186 GO:0016787
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 119 146 IPR006186 GO:0016787
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 179 199 IPR006186 GO:0016787
Sto7g0718 317 PRINTS Serine/threonine phosphatase family signature 201 217 IPR006186 GO:0016787
Sto7g0718 317 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 12 283 - -
Sto7g0718 317 Gene3D - 1 262 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0718 Sto-Chr7 5287115 5289701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0718 18 185 Calmodulin-binding Proteins AT5G63870 30.151 3.76e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0718 - - ini:109160101 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0718 7 5287115 5289701 Sto12g0464 12 3021096 3032148 CCT
Sto7g0718 7 5287115 5289701 Sto7g0718 7 5287115 5289701 ECH
Sto12g0464 12 3021096 3032148 Sto7g0718 7 5287115 5289701 ECH