Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto7g0705 | ATGGAAGAGAATAATAAGTCTGAAGTGCATTTGACTTCAGCAGCTGCTTTTGTGGAGGGTGGAATCCAGGATGCTTGTGACGATGCTTGCAGCATATGTCTTGAAGCATTTTGCGATAGTGATCCTTCAACAGTGACAAGTTGCAAGCACGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAGAGAAGCTCTCAATGCCCCATGTGTTGGCAGACCATCAGTCTGAAAGATCCAACCAGCCAGGAATTGCTTGATGCAgtggaaagagagagaaacattAGACTCAATCCACCTAGAAATGCCACAATATTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATCTGCCAGTTGGTGCAAATGATGCTGATCTTGAAGAGCGTATAATCCAACACTTAGCTGCTGCTGCTGCAATGGGACGAGCACGTCACATTGCTAGAAGGGAAGGCCAGAGAAACAGGTCATCAGCTCAAGGTCGTCCACACTTTTTGGTATTTTCAACCCATCCTAATTCATCTCCTGTGGCGCCTTCCTCTCCAACTCATGGGGGTGATGGTGAACCAACTCCGGCAATCGCTGTTGCCACTCTACCTTCTCCAACTCCTGCCTCTGGGGAAGAATCATCACAGCCAACTTCTGTTCCTCCTGTTCAAGCAGACCAGGTATCTGCTTCAGGATCTCGATCTACTATTCTTACTGCTGATCACCAAGGATCATCTTACAACAATAGGAGATCTCCTAGTCAGTCATCTCCAAGTAGTCAAGACAGAGCAGGACCATCAGAATTCCAATCATTTTCAGAATCCCTAAAGTCTAAGTTAAATGCAGTTTCAACGAGATATAAAGAGTCTATTTCCAAGAGCACAAGAGGTTGGAAGGAGAGATGGTTCTCTCGGAATAGCTCTATGTCTGATTTGGGATCTGAAGTTAGACGAGAGGTTAATGCAGGAATTGCAACTGTATCACGCATGATGGAACGCCTGGAAACCAGAGACGGTGATAGGACTAACAGCGATTCTGCTCCGAGTCATTTGGAAGATGGTTCAAATGCTGGATCAAATAACCAGCGTTTACCAGACACTGAAGGTGACAGTCTACTGAGAGACAGTGACAGGAAAACATCTTTTGCTGCAGGTTCTAGTTCAAATTAA | 1158 | 0.4439 | MEENNKSEVHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQTISLKDPTSQELLDAVERERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNSSPVAPSSPTHGGDGEPTPAIAVATLPSPTPASGEESSQPTSVPPVQADQVSASGSRSTILTADHQGSSYNNRRSPSQSSPSSQDRAGPSEFQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRNSSMSDLGSEVRREVNAGIATVSRMMERLETRDGDRTNSDSAPSHLEDGSNAGSNNQRLPDTEGDSLLRDSDRKTSFAAGSSSN | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto7g0705 | 385 | MobiDBLite | consensus disorder prediction | 344 | 363 | - | - | |
Sto7g0705 | 385 | ProSiteProfiles | Zinc finger RING-type profile. | 30 | 70 | IPR001841 | - | |
Sto7g0705 | 385 | MobiDBLite | consensus disorder prediction | 327 | 343 | - | - | |
Sto7g0705 | 385 | Pfam | Ring finger domain | 29 | 70 | IPR001841 | - | |
Sto7g0705 | 385 | SUPERFAMILY | RING/U-box | 23 | 78 | - | - | |
Sto7g0705 | 385 | MobiDBLite | consensus disorder prediction | 165 | 385 | - | - | |
Sto7g0705 | 385 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 385 | - | - | |
Sto7g0705 | 385 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHF2A | 1 | 385 | - | - | |
Sto7g0705 | 385 | MobiDBLite | consensus disorder prediction | 165 | 181 | - | - | |
Sto7g0705 | 385 | MobiDBLite | consensus disorder prediction | 203 | 287 | - | - | |
Sto7g0705 | 385 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 6 | 79 | IPR013083 | - | |
Sto7g0705 | 385 | SMART | ring_2 | 30 | 70 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto7g0705 | Sto-Chr7 | 5179670 | 5183455 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto7g0705 | 27 | 78 | C3H Transcription Factor Family | AT5G15790 | 42.308 | 2.58e-11 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto7g0705 | K19043 | - | gmx:100814908 | 621.698 |