Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0697 ATGGTCTCCCTACCAAGGGCTGCCGCTGCAGAATACCACCACTTAGCTACCAATGGCTTCCCTCATTCTGCTAGATCTATCATTCTGAATGTTAAATGGAGCCCTCCCTTGGAGGGATGGTGGAAATTAAACACTGACGGAGCTTGCTCTGGTAATCCTGGGCCCTTTGCCATTGGAGGGATTATCCGAAACCAATTGGGGAATTGGATTTCAGGGTATTCCGGTTATGTTGGAACCGGTACTGCCCTTAAAGCTGAGTTGTGGGCTATTTCTAGTGGTATTAAACTTGCCAGTAACCTAGGTTGCAAACATCTTTGGATTGAATCTGACTCACTTTTGGCTTGCAATCTGCTTTTTGATCACTCTTTGTCTCACCTTCATAGTATTGGAATCTTATCTCCTTTTGCACGTCAAGCCTTCGGAAATTCTCTAGACTTAAGCTTTCACACACCTTCAGAGAAGGAAACCAGTGCGTTGATCAACTTGCTAAGCACTGCCTTTTGGTCTCCTTTTCAAGTCAACCTCAATAGTTATGCACCCCATGAACACGAAGAACAAGAAGATAATGATTCTATTATTGCTCCACCTGCTCCCTCTCCCATCAGGCCCCACATCGGAGAGAGGGACTTCTTCAACACTACCACCAATATTATCAACGATGACCACCGCAATTATAAGCTTCTCGCCCCTTCTAATTCTCATGAtcttccctccccttcttcttcctctctcttcccTTTCAAAGTAAATACTGGTCTCAATCTTCTTACTACCAATTCTAGTAATGACCATTCCATGGTGGAAGAGGACTTATCAGCTCTTCCAGGAAACAGAAAAGGCATATGTGAGTTGGCGATTGTGGAAGCAGAACTAGAGCGAATAAAGATGGAGAATCTTCAATTGAAGAACACACTCGATGAAGTGACTAGGGATTACAATAGGTTGGAGATGCATTTGGTGAACTTGATGAATGATGGAAAGCGCGAGGATCATAATAACGAAGACGAGattatggaagaagaagaagaagaagtattaGGAGAGAAGAAATTACAAATTGGGAATAACAACAATACTAATACTAAtactaatactaataataataataataatgggggAGATAATGGAGAGTCGTTAGTGTTAGTGCCTAGACAGTTTATGGATCTTGGGCTGGCGGATACTAGCGATCACGAGCCTTCGCTTTCTTCAACAGTGGGAAGAAGCCGAGAAGGTTCTTCACCTCCTGCTGCTGCTTCTGGCGTTGAAGTGGCTTCAAGAAAGAATGATGAACACAAGAAGGAATTCGGAATTAGGGGAATGGAAAGAGAACAAGATAATCATACCCCTGCTTCACCTACTCAACCACCTAATTTCCTTACTAACAAGATTCCCAGATTCAATTCTCCAGAAAATGCTGATCAAGCAGCTGAAGCCACCATGAGGAAGGCCAGAGTCTCTGTTCGAGCTCGATCAGAAGCACCCATGATCACTGACGGATGCCAATGGAGAAAGTACGGACAAAAGATGGCGAAAGGGAACCCATGTCCTCGAGCTTATTACCGGTGCACGATGGCGGGAGGTTGCCCTGTTCGGAAACAAGTACAGAGGTGTGCCGAGGACAGGACAATCCTAATCACAACCTACGAAGGTAACCACAACCATCCCCTGCCTCCCACCGCCATGGCGATGGCCCAAACAACCTCCTCCGCCGCCAGGATGCTACTCTCCGGCTCGATGTCCAGCACCGACGGCCTAATGAACGGCAATTTCCTCACAAGGGCACTCCTCCCCTGTTCCTCCAGCATGGCCACCATCTCCGCCTCCGCCCCCTTCCCGACGGTCACCTTGGATCTGACCCAATCGCCCAATCCCTTGCAGTTCCCGCAGCGACAACCCAATCAGTTCCAGATTCCGTTCCCTAATTCACCCGCTGCTTCGTTGCTGCCTCAGATTTTTGGTCACGCGCTCTATAACCAGTCCAAGTTTTCCGGTCTACATGTGTCTCAGCAGAGTGGCGAGCCttccaccgccgccgccgccgcggcGGGGGGGATGGACACGGTCAGTGCGGCCTCCGCGGCGGCCATCGCGGCGGACCCCAACTTCACGGCGGCTCTGGCGGCGGCGATCAGTTCTATTATTGGTGGGGCTCAGCCGAATAACAATAGTGTCGCTAGCAGCGGGAGTGGGAGTGGGGGTGGGGGagggaataataataataatgttacatctagtaataataataataatagtaatactaGTGGAGGCAATAAAATCGGTAACTCTAATTTTTCTGGGAATTAA 2304 0.4501 MVSLPRAAAAEYHHLATNGFPHSARSIILNVKWSPPLEGWWKLNTDGACSGNPGPFAIGGIIRNQLGNWISGYSGYVGTGTALKAELWAISSGIKLASNLGCKHLWIESDSLLACNLLFDHSLSHLHSIGILSPFARQAFGNSLDLSFHTPSEKETSALINLLSTAFWSPFQVNLNSYAPHEHEEQEDNDSIIAPPAPSPIRPHIGERDFFNTTTNIINDDHRNYKLLAPSNSHDLPSPSSSSLFPFKVNTGLNLLTTNSSNDHSMVEEDLSALPGNRKGICELAIVEAELERIKMENLQLKNTLDEVTRDYNRLEMHLVNLMNDGKREDHNNEDEIMEEEEEEVLGEKKLQIGNNNNTNTNTNTNNNNNNGGDNGESLVLVPRQFMDLGLADTSDHEPSLSSTVGRSREGSSPPAAASGVEVASRKNDEHKKEFGIRGMEREQDNHTPASPTQPPNFLTNKIPRFNSPENADQAAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSTDGLMNGNFLTRALLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPQRQPNQFQIPFPNSPAASLLPQIFGHALYNQSKFSGLHVSQQSGEPSTAAAAAAGGMDTVSAASAAAIAADPNFTAALAAAISSIIGGAQPNNNSVASSGSGSGGGGGNNNNNVTSSNNNNNSNTSGGNKIGNSNFSGN 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0697 767 Gene3D - 39 127 IPR036397 GO:0003676
Sto7g0697 767 Gene3D WRKY domain 481 558 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto7g0697 767 MobiDBLite consensus disorder prediction 351 378 - -
Sto7g0697 767 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 198 752 IPR044810 GO:0003700
Sto7g0697 767 MobiDBLite consensus disorder prediction 722 767 - -
Sto7g0697 767 Coils Coil 284 344 - -
Sto7g0697 767 MobiDBLite consensus disorder prediction 181 204 - -
Sto7g0697 767 MobiDBLite consensus disorder prediction 392 469 - -
Sto7g0697 767 Pfam WRKY DNA -binding domain 498 555 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto7g0697 767 MobiDBLite consensus disorder prediction 424 445 - -
Sto7g0697 767 CDD RNase_H_like 43 132 IPR044730 -
Sto7g0697 767 SUPERFAMILY Ribonuclease H-like 39 120 IPR012337 -
Sto7g0697 767 SUPERFAMILY WRKY DNA-binding domain 489 557 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto7g0697 767 SMART WRKY_cls 496 556 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto7g0697 767 Pfam Reverse transcriptase-like 44 119 IPR002156 GO:0003676|GO:0004523
Sto7g0697 767 MobiDBLite consensus disorder prediction 351 376 - -
Sto7g0697 767 PANTHER OS05G0567200 PROTEIN 198 752 - -
Sto7g0697 767 MobiDBLite consensus disorder prediction 446 469 - -
Sto7g0697 767 MobiDBLite consensus disorder prediction 396 410 - -
Sto7g0697 767 ProSiteProfiles WRKY domain profile. 491 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0697 Sto-Chr7 5120539 5129717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0697 206 716 WRKY Transcription Factor Family AT1G62300 46.816 3.49e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto7g0697 RVT_3 4.8e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0697 - - gmx:100127384 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0697 7 5120539 5129717 Sto12g0490 12 3215827 3217722 CCT
Sto7g0697 7 5120539 5129717 Sto9g1901 9 23293450 23297134 ECH
Sto7g0697 7 5120539 5129717 Sto10g0483 10 3920785 3923429 ECH
Sto7g0697 7 5120539 5129717 Sto7g0697 7 5120539 5129717 ECH