Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0689 ATGGAGGAAGAGAGGATGAGGAAAGGACCATGGACGTCCAGAGAAGATGCAATACTAACAGAGTACGTGAAGAAGCATGGCGAAGGCAATTGGAACAACGTCCAATACAACTCACCCTTGGCTCGCTGTGGCAAGAGCTGTCGTCTCCGATGGGCGAATCATCTCCGTCCAAATCTCAAGAAAGGCGCTTTTTCTCCGTTCGAACAATCCGCCATCATTTACCTTCACGCCAAGCTCGGAAACAAATGGGCTCGCATGGCCTCCTTCGTATatctctttctttgttttattttatttatttatttctctgcTTCCCAATTACCTGGGAGAACAGACAACGAAATAAAGAACTTTTGGAACACGAGATTGAAAAGATGCCTGAAAGCAGGATCGCCTCTATATCCTCCTATTTCTCCTCTCGTTATCACTCAATTGAAATTTTCCAATCTCCAGGGGCAGAGTGTTCCTATGTTCTCCTCCCATGTTTCTCCATAtgccccttcttcttcttctaccacCCTGCCCAATGATCATCCTCTTCCTGCTCCTCTCCCCTCAAACTTTGTGTTTGGCTTGAATGACCAGAACTTGTCAAACCAGACACCTTTTGGCTTCATGGCTTCATCAGATTCAACTGCTGCTAATAATGACTACTCTGGATATGAAGctccaccaccattgatggagTCAAACAGTAGTGGCCTGCTAGAGGACCTAGTGTTGGAGGCTCAAGCCCTTTCTCACAACCACAAGTCTAAGACGCAATCCGAGGCCATTATTGACAAAGAACAACACAACATTAATGTGGGAATGGATCATTTTCCCATTCTCCCATTCTCAACAGAAGCAGGGAAGGACGCAGATGGCGAGACTAATGCATTATCAATGGAGAAGAAAGATGATGGAGACTTGTTCAGCATGGTTAGCAATTTCACCTCACAATTGCCAAAGGAAATTGAAAGTGAAGCAGCTGCTGGGGCTTCATGGGAACCCACTGATGAGGAATTTGGTTGGGCTATGGGAAATTGCTGGGACGACGACGACAACATTCCTGGAATGTTCTAG 1065 0.4272 MEEERMRKGPWTSREDAILTEYVKKHGEGNWNNVQYNSPLARCGKSCRLRWANHLRPNLKKGAFSPFEQSAIIYLHAKLGNKWARMASFVYLFLCFILFIYFSASQLPGRTDNEIKNFWNTRLKRCLKAGSPLYPPISPLVITQLKFSNLQGQSVPMFSSHVSPYAPSSSSTTLPNDHPLPAPLPSNFVFGLNDQNLSNQTPFGFMASSDSTAANNDYSGYEAPPPLMESNSSGLLEDLVLEAQALSHNHKSKTQSEAIIDKEQHNINVGMDHFPILPFSTEAGKDADGETNALSMEKKDDGDLFSMVSNFTSQLPKEIESEAAAGASWEPTDEEFGWAMGNCWDDDDNIPGMF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0689 354 SUPERFAMILY Homeodomain-like 5 119 IPR009057 -
Sto7g0689 354 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 189 - -
Sto7g0689 354 Pfam Myb-like DNA-binding domain 11 68 - -
Sto7g0689 354 CDD SANT 10 55 IPR001005 -
Sto7g0689 354 SMART sant 60 125 IPR001005 -
Sto7g0689 354 SMART sant 7 57 IPR001005 -
Sto7g0689 354 Gene3D - 8 60 - -
Sto7g0689 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 59 IPR017930 -
Sto7g0689 354 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Sto7g0689 354 ProSiteProfiles Myb-like domain profile. 56 123 IPR001005 -
Sto7g0689 354 CDD SANT 63 123 IPR001005 -
Sto7g0689 354 Gene3D - 63 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0689 Sto-Chr7 5052385 5053767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0689 6 135 MYB Transcription Factor Family AT2G32460 70.000 4.00e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g0689 Myb_DNA-bind_6 2.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0689 K09422 - gmx:100784779 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0689 7 5052385 5053767 Sto7g0689 7 5052385 5053767 ECH