Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0688 ATGGAGGAAGAGGGGATGAGGAAAGGACCATGGACGTCTAAAGAAGATGCAATACTAATAGAGTACGTGAAGAAGGACGGCGAAGGCAATTGGAACAACGTCCAATACAACTCAGCCTTGGCTTACTGTGGCAAGAGCTGTCGTCTCCGATGGGCGAATCATCTCCGTCCAAATCTCAGAAAAGGCGTTTTCTCTTCATTCGAACAATCCGCCATCATTTACCTTCACTCTAAGATCGGAAAAAAATGGGCTCGCATGGCCTCCTTCGTAtatctctttcttttcattctttatttTGACCGCGTGTCAGTCATAAATTTTGTGACTGcctatcagtcactaaatttgtga 351 0.4046 MEEEGMRKGPWTSKEDAILIEYVKKDGEGNWNNVQYNSALAYCGKSCRLRWANHLRPNLRKGVFSSFEQSAIIYLHSKIGKKWARMASFVYLFLFILYFDRVSVINFVTAYQSLNL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0688 116 Gene3D - 8 60 - -
Sto7g0688 116 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Sto7g0688 116 CDD SANT 10 55 IPR001005 -
Sto7g0688 116 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 88 - -
Sto7g0688 116 Pfam Myb-like DNA-binding domain 11 66 - -
Sto7g0688 116 SMART sant 60 114 IPR001005 -
Sto7g0688 116 SMART sant 7 57 IPR001005 -
Sto7g0688 116 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 59 IPR017930 -
Sto7g0688 116 SUPERFAMILY Homeodomain-like 5 90 IPR009057 -
Sto7g0688 116 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0688 Sto-Chr7 5049410 5049760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0688 1 88 MYB Transcription Factor Family AT2G32460 69.318 1.25e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g0688 Myb_DNA-bind_6 9.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0688 K09422 - gmx:100784779 141.354