Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0677 ATGGATGTGGCTCTGATGATTTGGATTTGGGTTCTTCTTGGTGGTATTGCCCACTGCCAAAGACCTGCGTCTGTGAATATTGGTGcggttttttcttttgattcGGTCATTGGTGGAGTTGCAAAAGTGGCGATGGAAATGGCCGTCTCTGACGTCAATGCAGACCCAATAGTTCTTAATGGGACGAAGCTAAATTTGATAATGGAGGATGCCTCTTGCAGCGTCTTTTTGGGATCCATTGGAGCGTTTCGGGCACTTGAGCAAGGGGTTGCAGCTATAATCGGCCCACAGTCATCTTCCATAGCTCATGTGATTTCTCAAATTGCTAATGGTCTTCAAGTTCCTCTTGTTTCATATGCAGCGACTGATCCAACCCTCACTGCCCTCCAGTTTCCTTACTTTTTTCGGGCTGTATCAAGTGACTCTGAGCAAATGGCTGCAATGTCCGACTTAATCGAATTCTACGGATGGAAAGAGGTCATTGCCGTCTTCTTGGATGATGACTATGGAAGAAATGGAATATCTGTTTTGGGTGATGAACTTCAGAAACGGAGACTGAGAATTGCTTATAAGTTACCTTTAAGTGTTCAGTTTGATCCGGAAGAAATCACTAACTTGCTCAATCAATCCAAAATATTTGGCCCTCGTGTCTATGTTGTTCACATCAACTCAGATCCTAGATTAAGATTTTTCCACATAGCCCACAAACTTAAAATGATGGATAGTGACTATGTCTGGCTTGCCACTGATTGGCTATCTGCTACCATAGATTCATTCTCTTCTGCACAGATTCAAACCTCTCTCAGCGTCCTGCAAGGGGTGGTTGCGCTTCGCCAACACATTCCAGATTCTATCCAGAAAAGAGCTTTCGTTTCACGGTGGACAAAATTGCAGAATGAAAGTGCAGTAAGAATGGGCCTAAACACTTATGGATTTTATGCTTATGATTCAGTTTGGGCTGTTGCACATTCAATTGATAAGTTCATTCAAATacacaagaatattatatttgcTGTCAATAATAACTCTAAGCTACATCATTCAGAAGCAGTCGATATTCAGCTTGACAAGCTCAAAGTCTTTGCTAATGGTTCTGATGTGATCAACATACTATTACAAACAAATTTTACTGGTGTGAGCGGTGAAGTTCAATTCCATACTGACAGGAACATCATTAGTAGTGGCTACGATGTTATCAATATCAATCAGATGATGATCAGAGTTGGATATTGGTCTAAtcatttaggattttcagttgTGCCTCCTGAAACTCTCAAAAATAAAGGACATGGCAGGGTTCCCCAAGATCAGAAGCTTGACAATATAACTTGGCCAGGTGGAAAGACCGAAAGACCACGTGGGTGGGTGATTGCTGATGATGCAAGACCACTGAGAATTGTAGTGCCCAGGAGGGCAAGTTTTGTTGAATTCGTCACTGAATTGAATGATAGTCATAAAATTCAAGGATACTGTATTGATGTCTTCAAGAAAGCACTGGAGTTCATACCATATGATGTTCCTTATGTATTGAAGCCTTTTGGGAATGGTCAATCAAATCCCCACTATGATGCACTTGTGAAGATGGTTGCTGATAATATTTATGATGCAGCAGTTGGAGACATAGCAATTGTGACGAACCGTACTAGGATTGTGGATTTTTCCCAGCCTTATACATCAACTGGCCTTGTTATAGTGGCTCCAATTGACAAAGGAAAATCAAGTGCTTGGGTATTTCTCAAACCATTTACTGCAGATATGTGGTGTGCCACTGCAGCTTCATTTGTAATGGTTGGGGTAGTTATATGGATTCTTGAGCACCGAGTAAATGACGATTTCCGTGGTCCTCCTAAGAGGCAAATTGTGACAATGTGTATGTTCAGCCTCTCAACACTGTTTAAGACAAATCAGGAAAACACAGTAAGCTCGCTTGGTCGAATGGTGATGATAGTATGGCTTTTTCTATTGATGGTGATCACAGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAACAGCTTTCATCACCCATCACAGGAATTGATAGCTTGATTGCAAGTAACTCGCCCATAGGCTACCAAGTAGGGTCATTTGCTTACAACTATTTGACAGAGAGCCTTTATGTACAAAGATCAAGACTTGTTCCTCTAGGTAACCCTGAGGAATATGCAAGAGCTCTTCAGCTAGGGCCTTCTCATGGAGGGGTAGCTGCTATCATAGACGAGCTTCCATACGTTGAGCTATTCCTGTCAAAACACAAGGATTTCGGTATTATCGGACAGCAATTTACCAGAAGCAGTTGGGGATTTGCATTTCAAAGAGAGTCTCCTCTTGCCCTTGACATGTCCACAGCAATTTTGAAACTGAGCGAGAATGGAGAGCTTCAGAAGATTCAAAAGGAGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGGAAAAGCAAAACTGACTCTAACCAACTTCACTTCACTAGCTTTTGGGGTTTATATCTCTCATGTGGTGTAGCCACTCTCGCCGCTCTTCTGGTGTTTCTGCTGCGAACAATTCGCCAATATGTCAGATACAAACAAAGGCAAAAAGATATCTCCCCTCCGTCTCTTGAGCCATCCACAAGTAAATGTTCCCACGTTATTTATAGCTTTTTTAACTTCATTGATGAGAAGGAAGAAGCCATCAAGAAAATTTTCACACACTGTGAAAATCCGCAACAGCAGCCGAGCTGA 2727 0.4125 MDVALMIWIWVLLGGIAHCQRPASVNIGAVFSFDSVIGGVAKVAMEMAVSDVNADPIVLNGTKLNLIMEDASCSVFLGSIGAFRALEQGVAAIIGPQSSSIAHVISQIANGLQVPLVSYAATDPTLTALQFPYFFRAVSSDSEQMAAMSDLIEFYGWKEVIAVFLDDDYGRNGISVLGDELQKRRLRIAYKLPLSVQFDPEEITNLLNQSKIFGPRVYVVHINSDPRLRFFHIAHKLKMMDSDYVWLATDWLSATIDSFSSAQIQTSLSVLQGVVALRQHIPDSIQKRAFVSRWTKLQNESAVRMGLNTYGFYAYDSVWAVAHSIDKFIQIHKNIIFAVNNNSKLHHSEAVDIQLDKLKVFANGSDVINILLQTNFTGVSGEVQFHTDRNIISSGYDVININQMMIRVGYWSNHLGFSVVPPETLKNKGHGRVPQDQKLDNITWPGGKTERPRGWVIADDARPLRIVVPRRASFVEFVTELNDSHKIQGYCIDVFKKALEFIPYDVPYVLKPFGNGQSNPHYDALVKMVADNIYDAAVGDIAIVTNRTRIVDFSQPYTSTGLVIVAPIDKGKSSAWVFLKPFTADMWCATAASFVMVGVVIWILEHRVNDDFRGPPKRQIVTMCMFSLSTLFKTNQENTVSSLGRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNSPIGYQVGSFAYNYLTESLYVQRSRLVPLGNPEEYARALQLGPSHGGVAAIIDELPYVELFLSKHKDFGIIGQQFTRSSWGFAFQRESPLALDMSTAILKLSENGELQKIQKEWFCKMGCPEERKSKTDSNQLHFTSFWGLYLSCGVATLAALLVFLLRTIRQYVRYKQRQKDISPPSLEPSTSKCSHVIYSFFNFIDEKEEAIKKIFTHCENPQQQPS 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0677 908 CDD GluR_Plant 462 804 - -
Sto7g0677 908 SUPERFAMILY Periplasmic binding protein-like II 443 804 - -
Sto7g0677 908 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 906 - -
Sto7g0677 908 SMART GluR_14 465 806 IPR001320 GO:0015276|GO:0016020
Sto7g0677 908 PIRSF IGluLR_plant 1 907 IPR017103 -
Sto7g0677 908 Gene3D - 43 393 - -
Sto7g0677 908 Gene3D - 456 574 - -
Sto7g0677 908 Gene3D - 575 713 - -
Sto7g0677 908 Pfam Bacterial extracellular solute-binding proteins, family 3 482 804 IPR001638 -
Sto7g0677 908 Gene3D - 752 811 - -
Sto7g0677 908 CDD PBP1_GABAb_receptor_plant 26 421 IPR044440 -
Sto7g0677 908 Gene3D - 140 416 - -
Sto7g0677 908 PANTHER GLUTAMATE RECEPTOR 3.7 8 906 - -
Sto7g0677 908 Pfam Receptor family ligand binding region 43 402 IPR001828 -
Sto7g0677 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 38 54 - -
Sto7g0677 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 98 126 - -
Sto7g0677 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 314 326 - -
Sto7g0677 908 SUPERFAMILY Periplasmic binding protein-like I 17 446 IPR028082 -
Sto7g0677 908 Pfam Ligand-gated ion channel 805 837 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0677 Sto-Chr7 4946105 4951197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0677 3 908 Ion Channels AT2G32400 56.250 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0677 K05387 - gmx:100796389 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0509 12 3331210 3335658 Sto7g0677 7 4946105 4951197 CCT
Sto7g0677 7 4946105 4951197 Sto7g0677 7 4946105 4951197 ECH