Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0676 TTGGGTGGGAATGGAAATCACACCAAAGTAAATAATACTGTTCCGTCAATATCAAATGTCGTGAGAGTTGGAGCCCTTTTTACTCACAATTCGGTCATTGGAAGATCAGCTAAACCTGCAATTTTGACTGCTGTTGATGATGTTAATTCTGATACAAGCATTCTCAGTGGGATTAAGCTGGAAATTGTTTTACATGATACAAATTGCAGTGGATTTCTTGGAACAGTGGAAGCTCTGCAGTTGATGGAGGATAATGTGGTTGCTGCTATTGGTCCTCAGTCCTCTGGAATAGCTCATGTCATCTCTCATGTTGTGAATGAACTCCATATACCTCTTCTATCATTTGGGGCAACCGACCCTACTCTTTCTGCCCTGCAGTACCCATATTTTGTCCGCACTACCCAGAGTGACCATTTTCAGATGTATGCAATTGCAGACTTGATTGAACATTATGGATGGAGGGAGGTAATTACCATTTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGAATTGGGCGATGCCATGGCGCAAAAACGTGCCAAGATCTCCTACAAGGCTGCCTTCCCTCCCGATGCTTCCACAACTGATATAAGTGCATTGTTATCTAGAGTGAACTTAATGGAATCGCGGGTCTATGTTCTGCATGTAAATCCTGATTCTGGTTTGAACATCTTTTCTCTTGCCAAAAAGCTAGGGATGATGAGCAATGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTACTAGATTCGCAAGAACCAGCTAACCTTGACACGATGAAACTTTTGCAAGGGGTTGTTGCTTTTCGTCATCACACTCCCGATACTGATCTCAAAAAGACTCTTATCTCTAAGTTGAAAAACCGAAAAGACAAAGAGACTGCAGGCTTCAATTCTTatgcattatatgcatatgaTTCAGTTTGGTTAGTAGCCCATGCACTGCATGATTTTTTACTTAGTGAAGGTGGAAATATATCTTTCTCCAATGATCCAAAGTTGCATGACAATAATGGAAGCATGTTGAATTTATCATCGCTTCAAGCTTTTGATGGTGGTCCACTGTTTCTCCAGACAATCCTGCGAACAAATTTCACTGGTGTGAGTGGTCGAGTTCAGTTTGATGCAGACAAGAATTTAATTCATCCAGCATATGATATTCTAAACATTGGTGAATCAGGATCCCGTATAATTGGTTATTGGTCTGATTACTCTGGTCTGTCGGATGTAATTCCAGAATCTTTATACACAAAATCTCGTAACAATTCTGCTGGCAATAAACATCTGACCAGTGTGATATGGCCAGGAGGGACAACAACTACACCCAGGGGGTGGGTATTCCCCAATAATGGGAAGCCTCTGCGAATTGCAGTGCCAAACCGTATAAGCTACTTGGAGTTTGTTAGCAAAGACAAGAACCCTCCTGGTGTAAAAGGGTATTGCATTGATGTCTTTGAGGCAGCCATAAATTTGTTGCCTTATCCTGTCCCTCggcaatatatattatttggacaTGGTGATAGAAACCCTGACTACAATGAACTTGTGAATCAGGTTGGAGAACATAACTATGATGCAGCTGTTGGAGATGTTACAATTGTCACAAATAGGACAAGGATTGTGGATTTTACTCAGCCTTACATGACGTCAGGGCTGGTTGTAGTTGTTCCTGTCAAGGAGACAAAATCAAGTCCGTGGTCTTTCCTCAAGCCATTCACTGCACAAATGTGGTGTGTGACTGGTGCCTTCTTTCTTTTCGTGGGAGCTGTTGTATGGATTCTTGAACACCGACATAATCATGAGTTTCGTGGACGACCAAGGAAACAGCTTATAACAATCTTTTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTGCTCTGGGCCGATTGGTGCTAATCATATGGCTCTTTGTGGTGTTAATTATCAATTCAAGTTACACAGCTAGCTTGACATCCATCCTCACGGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTTTGATCTCAAGTAATCAACCAATCGGAATTCAAGACGGCTCATTCGCTCGAAAGTATCTCACAGATGAACTGAACATAGCTGAGTCTAGGATAGTCACATTGAAAAATCAGCAGGATTATATCGATTCCCTTCAGCGAGGACCTAGAAATGGAGGGGTAGTGGCTATTGTTGATGAACTTCCTTATATTGAGCTCCTCATGTCCAATACCAATTGTCAGTTCAGAACCGTAGGGCAGGAATTTACTAAAAGTGGATGGGGATTTGCATTCCAGAGGGACTCTCCACTTGCGGTGGACATGTCGACGGCAATCCTTCAACTTTCGGAGAACGGAGACCTACAAAAGATCCATGACAAATGGCTGTTAAGAAATGAGTGCTCTGTTGGTGCACAAACTGATGATGAAGATTCAAACCAGCTATCATTGAGTAGCTTCTGGGGGCTCTTCCTCATATCTGGGATTGCATGTCTGATTGCTTTGGTTGCCTTCTGTGTCAAGTTGTTCTGTCAATATATCAAATTTTCCCCAGACTCCCACGAGGAGGTCGACGAAGAAATGCACCCATCCAGGGCCAGGTCGAGACCCCCCACTAAAACTACtagtttcaagaacttgatgcTTTTTGCAGATAAGAAAGAAGCAGATATTAGAGAGAAACTGAGGAAGAAGAAACGCAGACGCAGCCGCAGCTTAGACTGGACATCCAGTTCACCCTAA 2748 0.4174 LGGNGNHTKVNNTVPSISNVVRVGALFTHNSVIGRSAKPAILTAVDDVNSDTSILSGIKLEIVLHDTNCSGFLGTVEALQLMEDNVVAAIGPQSSGIAHVISHVVNELHIPLLSFGATDPTLSALQYPYFVRTTQSDHFQMYAIADLIEHYGWREVITIFVDDDNGRNGISELGDAMAQKRAKISYKAAFPPDASTTDISALLSRVNLMESRVYVLHVNPDSGLNIFSLAKKLGMMSNGYVWIATDWLPSVLDSQEPANLDTMKLLQGVVAFRHHTPDTDLKKTLISKLKNRKDKETAGFNSYALYAYDSVWLVAHALHDFLLSEGGNISFSNDPKLHDNNGSMLNLSSLQAFDGGPLFLQTILRTNFTGVSGRVQFDADKNLIHPAYDILNIGESGSRIIGYWSDYSGLSDVIPESLYTKSRNNSAGNKHLTSVIWPGGTTTTPRGWVFPNNGKPLRIAVPNRISYLEFVSKDKNPPGVKGYCIDVFEAAINLLPYPVPRQYILFGHGDRNPDYNELVNQVGEHNYDAAVGDVTIVTNRTRIVDFTQPYMTSGLVVVVPVKETKSSPWSFLKPFTAQMWCVTGAFFLFVGAVVWILEHRHNHEFRGRPRKQLITIFWFSFSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSNQPIGIQDGSFARKYLTDELNIAESRIVTLKNQQDYIDSLQRGPRNGGVVAIVDELPYIELLMSNTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLRNECSVGAQTDDEDSNQLSLSSFWGLFLISGIACLIALVAFCVKLFCQYIKFSPDSHEEVDEEMHPSRARSRPPTKTTSFKNLMLFADKKEADIREKLRKKKRRRSRSLDWTSSSP 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0676 915 Gene3D - 568 685 - -
Sto7g0676 915 CDD PBP1_GABAb_receptor_plant 22 414 IPR044440 -
Sto7g0676 915 Pfam Bacterial extracellular solute-binding proteins, family 3 514 798 IPR001638 -
Sto7g0676 915 Gene3D - 452 567 - -
Sto7g0676 915 MobiDBLite consensus disorder prediction 896 915 - -
Sto7g0676 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 34 50 - -
Sto7g0676 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 94 122 - -
Sto7g0676 915 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 307 319 - -
Sto7g0676 915 Pfam Receptor family ligand binding region 38 393 IPR001828 -
Sto7g0676 915 SMART GluR_14 458 800 IPR001320 GO:0015276|GO:0016020
Sto7g0676 915 PANTHER GLUTAMATE RECEPTOR 3.4 13 900 - -
Sto7g0676 915 SUPERFAMILY Periplasmic binding protein-like II 432 800 - -
Sto7g0676 915 Gene3D - 136 410 - -
Sto7g0676 915 Gene3D - 686 801 - -
Sto7g0676 915 SUPERFAMILY Periplasmic binding protein-like I 17 449 IPR028082 -
Sto7g0676 915 Coils Coil 694 714 - -
Sto7g0676 915 CDD GluR_Plant 455 798 - -
Sto7g0676 915 Pfam Ligand-gated ion channel 799 833 IPR001320 GO:0015276|GO:0016020
Sto7g0676 915 Gene3D - 40 385 - -
Sto7g0676 915 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 900 - -
Sto7g0676 915 PIRSF IGluLR_plant 5 914 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0676 Sto-Chr7 4936840 4941099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0676 21 765 Ion Channels AT1G05200 68.591 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0676 K05387 - gmx:100802782 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0676 7 4936840 4941099 Sto12g0509 12 3331210 3335658 CCT
Sto7g0676 7 4936840 4941099 Sto7g0676 7 4936840 4941099 ECH