Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0673 ATGCCCTCCATGATCGGAAGGAACTCTAACGTTGGTGGTGTCTTCGGATCATCCTCAGGCCTCACTCTCGCTCAGCCAAACATGATGGAAGCCGTTGCTCACCTCCACCCGCATCTCGACATGAACCCCAACACCTCCGAGAGCGACATCCCccgcgccgccgccgccgccgacgATTTCGACAGCGCCACCAATTTCTTCAAGGAGTGCCCACACCCTGACGACAAACAGAGAAAAGAGCTGAGCCGAGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTCTGGTTCCAAAACAAGCGCACTCAGATGAAGACCCAGCACGAGCGTCAAGAGAACACACAACTGAGAACCGAAAACGAGAAGCTCCGAGCCGATAACATGAGATATAGAGAAGCTCTCACTAACGCCTCGTGTCCCAATTGTGGCGGTCCGACCGCTCTGGGCGAAATGTCCTTCGACGAGCACCATTTGCGAATCGAAAACGCGCGCCTCAGAGAAGAGATTGATCGGATTTCGGCGATTGCTGCGAAGTACGTAGGGAAGCCGGTGGTGAACTATCCACTACTTTCTTCTACGGTGAGCACTCCGCGTCCGTTGGAGCTAGGAATGGGCGGAGCAGATTTGTACGGTGGGGATGTTCTGAGGCCAATGAGTGGGCCCACGGAAGCTGATAAGCCGATGATAATAGAGCTGGCGGTGGCTGCCATGGAGGAGCTCGTGAGGATGGCTCAAATGGGTGAGCCATTGTGGCTCAACATGCCCACACTCGATGGAACCGCCTCCACCACCGTCCTCAACGACGACGAGTACGTTAGAACCTTCCCCCGTGGGATTGGTCCCAAACCTGCCGGCTTCAAGTGTGAGGCTTCACGCGAAACTGCTGTTGTCATCATGAACCATATCAATCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAATATTCTCCGGGATAGTCTCAAGAGCAATGACTGTGGAAGTATTATCAACGGGAGTAGCCGGGAATTACAACGGTGCCTTGCAAatgacaGCAGAGCTACAAGTACCATCACCACTAGTGCCGACAAGAGAGAGTTATTTTGTGAGGTATTGTAAGCAGCACGGGGATGGGACATGGGCGGTAGTGGATGTGTCGTTGGATAATTTGCGACCTAGTCCTTCAGTGAGATGTAGGAGAAGGCCTTCTGGTTGTTTAATTCATGAAATGCCTAATGGCTACTCAAAGGTGACATGGGTGGAGCATGTGGAAGTGGACGAGAGAGGGGTTCACGATCTATACAAGCAGCTGGTTAGCTGTGGTCACGCATTTGGTGCGAAGCGTTGGGTGGCCACTTTGGATCGTCAATGTGAGAGGCTCGCTAGTTCCTTGGCCACCAACATCCCCACGGGTGACGTTGGAGTGATCACGAACCAAGAAGGGAGGAAGAGTATGCTGAAGCTGGCAGAGAGAATGGTGATGAGCTTCTGCGCCGGAGTGAGTGCTTCTACGGCTCACACGTGGACCACGCTGTCCGGAACAGGAGCCGATGATGTCAGAGTGATGACACGTAAGAGCGTGGATGACCCTGGGAGGCCTCCGGGTATTGTCCTCAGTGCTGCCACCTCTTTCTGGATTCCGGTTCCTCCCAAACGATGGGATATTCTTTCCAACGGTGGAGTCGTCCAAGAAATGGCACACATAGCCAATGGCCAAGACACAGGAAATTGCGTGTCCCTACTTCGGAGTGCGAATTCGAGTCAAAGTAACATGTTGATATTGCAAGAGAGCTGCACGGACGCAACGGCGTCGTTTGTGATATATGCTCCGGTGGATATTGTGGCGATGAACGTGGTGCTGAATGGAGGGGATCCTGATTACGTGGCGCTGCTGCCCTCGGGATTCGCTATACTGCCCGACGGGACGGCGGCGGCCAACGGCGAGGGCGGGTCGCTGCTGACGGTGGCTTTTCAGATATTGGTTGATTCGGTTCCGACGGCTAAGCTGTCTCTTGGATCTGTGGCTACTGTGAATAATCTCATTGCATGCACTGTGGAGAGAATCAAGGCCTCTTTATCCTGTGAACCTGCTTGA 2076 0.5231 MPSMIGRNSNVGGVFGSSSGLTLAQPNMMEAVAHLHPHLDMNPNTSESDIPRAAAAADDFDSATNFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENTQLRTENEKLRADNMRYREALTNASCPNCGGPTALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPVVNYPLLSSTVSTPRPLELGMGGADLYGGDVLRPMSGPTEADKPMIIELAVAAMEELVRMAQMGEPLWLNMPTLDGTASTTVLNDDEYVRTFPRGIGPKPAGFKCEASRETAVVIMNHINLVEILMDVNQWSTIFSGIVSRAMTVEVLSTGVAGNYNGALQMTAELQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSVRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDERGVHDLYKQLVSCGHAFGAKRWVATLDRQCERLASSLATNIPTGDVGVITNQEGRKSMLKLAERMVMSFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRWDILSNGGVVQEMAHIANGQDTGNCVSLLRSANSSQSNMLILQESCTDATASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTAAANGEGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEPA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0673 691 CDD homeodomain 65 107 IPR001356 GO:0003677
Sto7g0673 691 Coils Coil 105 132 - -
Sto7g0673 691 ProSiteProfiles START domain profile. 221 456 IPR002913 GO:0008289
Sto7g0673 691 Gene3D - 285 437 IPR023393 -
Sto7g0673 691 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 64 688 IPR042160 -
Sto7g0673 691 SMART HOX_1 48 110 IPR001356 GO:0003677
Sto7g0673 691 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 64 688 - -
Sto7g0673 691 CDD START_ArGLABRA2_like 225 452 - -
Sto7g0673 691 Gene3D - 36 123 - -
Sto7g0673 691 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Sto7g0673 691 SUPERFAMILY Homeodomain-like 65 110 IPR009057 -
Sto7g0673 691 SUPERFAMILY Bet v1-like 221 455 - -
Sto7g0673 691 Pfam Homeodomain 65 104 IPR001356 GO:0003677
Sto7g0673 691 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Sto7g0673 691 Pfam START domain 231 453 IPR002913 GO:0008289
Sto7g0673 691 SUPERFAMILY Bet v1-like 472 683 - -
Sto7g0673 691 SMART START_1 230 453 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0673 Sto-Chr7 4923348 4926645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0673 66 691 Homeobox Transcription Factor Family AT1G05230 80.000 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto7g0673 START 5.8e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0673 K09338 - mnt:21401227 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0673 7 4923348 4926645 Sto12g0512 12 3346159 3349881 CCT
Sto7g0673 7 4923348 4926645 Sto7g0673 7 4923348 4926645 ECH