Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0670 ATGGCTGACGTGGATCATCAAACCTCTCCTCATGTTTCTGCAGATTCTACAGAACAATCCAATCAAGCTTGCAAGGTTGCATTTTCTGAAGATGAGGAGACCCTAATTACTAGAATGTATAATCTAGTTGGTGAGAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCagaggaaataaaaatttactGGACTTCAAGATACTCCATTACCCAATGA 225 0.3822 MADVDHQTSPHVSADSTEQSNQACKVAFSEDEETLITRMYNLVGERWSLIAGRIPGRTAEEIKIYWTSRYSITQ 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0670 74 Pfam Myb-like DNA-binding domain 25 67 IPR001005 -
Sto7g0670 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 74 IPR017930 -
Sto7g0670 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 14 72 - -
Sto7g0670 74 SMART sant 24 72 IPR001005 -
Sto7g0670 74 MobiDBLite consensus disorder prediction 9 23 - -
Sto7g0670 74 Gene3D - 27 69 - -
Sto7g0670 74 CDD SANT 27 66 IPR001005 -
Sto7g0670 74 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 14 72 - -
Sto7g0670 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Sto7g0670 74 MobiDBLite consensus disorder prediction 1 23 - -
Sto7g0670 74 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0670 Sto-Chr7 4889656 4890126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0670 29 68 MYB Transcription Factor Family AT5G35550 67.500 3.03e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g0670 Myb_DNA-binding 3.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0670 - - pop:18106978 112.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0670 7 4889656 4890126 Sto7g0670 7 4889656 4890126 ECH