Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0659 ATGTTGAATGAGGAGGGAGTTATCGATTGTCGATGTGACTACTGTGGAACAGTGAGAGCAGTGGTGTACTGCAATTCAGATTGTGCTCGTCTCTGCTTGAACTGCGATCGTCGTGTTCACACCGCTAATTCGTTGTTTCACAGGCATCCTCGCTCGCTCATATGCGATAAATGCCGTTTCCAACCAGCGATTTTCTACTGCAGGGATGATAAAATCTCCCTGTGCCAAAGTTGTGAGTATAAACGAAATGGGCGTCCGGGATCGGGAAATTGCCGTATGCCGTTGGATTGTTATACAGGTTGTCCCTCTTTCACTGAGATGTCTAGGCTATGGCCATTTGCTCTTGATGCTACCCTTTCTgcgtattcttcttcttcttcctcaaaaAGTGGTTTAGATATAGGTTGGGAATTGTTTAGTAATTTGCCTGAAGATGGTAGCGAGTGTTCGGAGCAGCCAgataataatgaaatagaatCTTGTGCTAACAATGAACCTCGGATGCCTCTATCTTCTACTCttcaaccaaatccaaatcCCATGCCCTACTCTAGAGACCAACTACATCTCCTTGCTCAAGACTCAAAACTGCCCAAGGGATGCCCTAATTCCAAGGATATTGAAATTCATGATGGTGATGGTCTCGGTAAAGGTCTAAACCTCAATGTTCAATTAAACTTTGAAGGTGGTAATGAAATATTTGATTGCTCTCAAGATTCTACCAGTTACCACCTTGAGGATGGAGGATTGGATTGTCTGTTAAAGGAAGAAAACATATCAGTTGCAGGATCTAATGGCCTTTCTCAGAATGCCATGGAGgcaCCATCGTCTATCCAACAAGATTTTGTGGGTTTTCAATCATCCACTGGCAGTGGGTCAGGTACTGTGATGCAGCCAATAAACAGTAATGCAAACTGTGTGCTTATGAATCTTAGCTGCAACAGAAACATGGATCTGGGATATCCTCAGGTTCAAATTCATTCAAACATACCACTTTCATTACCCAATATCAATGGTGAAAGTAGTACTTCCACTACTGATCATCAAGACTGTGGGTTATCACCAGCACTATTGACAGTTGATAAGCCATGGGAATCAAATTTGGAGCTTACAGGCCCACAAGCAAGGGATATAGCTAAAATGAGATACtttgagaaaaagaagaatCGAATGTTTGGTAAGCAAATAAGGTATGCATCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTGAAAGGTAGATTTGTCAAAGCAGGAGAAGCATATGATTATGATCCTCTTGTTTCAGAAAACGACTAA 1299 0.4003 MLNEEGVIDCRCDYCGTVRAVVYCNSDCARLCLNCDRRVHTANSLFHRHPRSLICDKCRFQPAIFYCRDDKISLCQSCEYKRNGRPGSGNCRMPLDCYTGCPSFTEMSRLWPFALDATLSAYSSSSSSKSGLDIGWELFSNLPEDGSECSEQPDNNEIESCANNEPRMPLSSTLQPNPNPMPYSRDQLHLLAQDSKLPKGCPNSKDIEIHDGDGLGKGLNLNVQLNFEGGNEIFDCSQDSTSYHLEDGGLDCLLKEENISVAGSNGLSQNAMEAPSSIQQDFVGFQSSTGSGSGTVMQPINSNANCVLMNLSCNRNMDLGYPQVQIHSNIPLSLPNINGESSTSTTDHQDCGLSPALLTVDKPWESNLELTGPQARDIAKMRYFEKKKNRMFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVSEND 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0659 432 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 10 430 - -
Sto7g0659 432 ProSiteProfiles CCT domain profile. 376 418 IPR010402 GO:0005515
Sto7g0659 432 ProSiteProfiles Zinc finger B-box type profile. 12 54 IPR000315 GO:0008270
Sto7g0659 432 CDD Bbox1_BBX-like 12 54 - -
Sto7g0659 432 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 10 430 - -
Sto7g0659 432 Pfam CCT motif 376 418 IPR010402 GO:0005515
Sto7g0659 432 SMART bboxneu5 7 54 IPR000315 GO:0008270
Sto7g0659 432 ProSiteProfiles Zinc finger B-box type profile. 50 95 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0659 Sto-Chr7 4814895 4817049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0659 11 426 C2C2-CO-like Transcription Factor Family AT3G21880 37.972 2.24e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sto7g0659 CCT 1.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0659 - - gmx:100804738 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0659 7 4814895 4817049 Sto7g0659 7 4814895 4817049 ECH