Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0644 ATGGACATTGACTCCTCATACACCTCCAATTGGCTCTACGATTATGGCTTTGATATCTCCGTTGCCGGACCTGAATTCCCCGCCACCGCTACCGCTGGTTTCAACTGGGCGCCTCAAACTTTCAAGGGTTCTCCCGATATGAGTAATTACAGCTTGGACGTGGAATACTCACTGGAGAATTCAACTGTCCTGGAAAATAGCCCATCAAAACGGTTGAAGTCTGAATCATGTGCATCTGGCACCAAAGCATGTCGTGAGAAATTGCGGAGGGATAAACTGAATGAGAGGTTCCTGGAATTGAGTTCTATCTTGGAGCCAGGTAAGATGCCCAAGACAGATAAGGCTGCAATATTAAGTGATGCAGTTCGTATGGTAACCGAATTAAGAAGTGAAGCCCAGAAGCTGAAGGAAGCAAACGATGAATTGTTTGTCAGGATTAAGGAATTGAAgACTGAGAAGAATGAGCTTCGTGATGAGAAAAATAGGCTGAAGATGGATAAAGAAAGGCTGGAGATACAAGTCAAAGCTATGAATGCACAGCCTACCTACCTTTCTCATCCTTCTGCAACACTTACTGCTCAAGGGAAAAATGCCAGCCACAAGTTGATACCTTTTGTTGGTTATCCTGGAATTGCCATGTGGCAATTTTTGCCACCTTCTGCAGTTGATACATCCCAAGATCATCTTCTTCGCCCTCCCGTGGCTTAA 708 0.4477 MDIDSSYTSNWLYDYGFDISVAGPEFPATATAGFNWAPQTFKGSPDMSNYSLDVEYSLENSTVLENSPSKRLKSESCASGTKACREKLRRDKLNERFLELSSILEPGKMPKTDKAAILSDAVRMVTELRSEAQKLKEANDELFVRIKELKTEKNELRDEKNRLKMDKERLEIQVKAMNAQPTYLSHPSATLTAQGKNASHKLIPFVGYPGIAMWQFLPPSAVDTSQDHLLRPPVA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0644 235 Gene3D - 70 126 IPR036638 GO:0046983
Sto7g0644 235 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 5 235 - -
Sto7g0644 235 CDD bHLH_AtILR3_like 82 157 - -
Sto7g0644 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 128 IPR011598 GO:0046983
Sto7g0644 235 Coils Coil 118 180 - -
Sto7g0644 235 Pfam Helix-loop-helix DNA-binding domain 81 128 IPR011598 GO:0046983
Sto7g0644 235 SMART finulus 83 134 IPR011598 GO:0046983
Sto7g0644 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 154 IPR036638 GO:0046983
Sto7g0644 235 Gene3D arf6 gtpase in complex with a specific effector, jip4 127 181 - -
Sto7g0644 235 PANTHER BHLH TRANSCRIPTION FACTOR 5 235 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0644 Sto-Chr7 4734303 4737208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0644 5 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.909 1.47e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto7g0644 HLH 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0644 - - gmx:100806838 311.612